Protein–RNA interactions for Protein: P01130

LDLR, Low-density lipoprotein receptor, humanhuman

Predictions only

Length 860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRP01130 AL589674.2-201ENST00000604304 337 ntBASIC5.55□□□□□ -1.52
LDLRP01130 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LDLRP01130 AC073592.7-201ENST00000623659 507 ntBASIC5.55□□□□□ -1.52
LDLRP01130 AC004808.2-201ENST00000627965 773 ntBASIC5.55□□□□□ -1.52
LDLRP01130 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LDLRP01130 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LDLRP01130 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
LDLRP01130 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.55□□□□□ -1.52
LDLRP01130 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.55□□□□□ -1.52
LDLRP01130 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
LDLRP01130 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LDLRP01130 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
LDLRP01130 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
LDLRP01130 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
LDLRP01130 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.54□□□□□ -1.52
LDLRP01130 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.54□□□□□ -1.52
LDLRP01130 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
LDLRP01130 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
LDLRP01130 RN7SKP145-201ENST00000363291 303 ntBASIC5.54□□□□□ -1.52
LDLRP01130 AL139039.2-201ENST00000407436 479 ntBASIC5.54□□□□□ -1.52
LDLRP01130 BX284632.2-201ENST00000421091 399 ntBASIC5.54□□□□□ -1.52
LDLRP01130 RCC2P2-201ENST00000422174 918 ntBASIC5.54□□□□□ -1.52
LDLRP01130 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.54□□□□□ -1.52
LDLRP01130 AJ239321.1-201ENST00000424255 564 ntBASIC5.54□□□□□ -1.52
LDLRP01130 RPS6P14-201ENST00000425165 719 ntBASIC5.54□□□□□ -1.52
LDLRP01130 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.54□□□□□ -1.52
LDLRP01130 NANOGP4-201ENST00000427230 913 ntBASIC5.54□□□□□ -1.52
LDLRP01130 NPM1P22-201ENST00000427761 952 ntBASIC5.54□□□□□ -1.52
LDLRP01130 MTATP6P11-201ENST00000428071 670 ntBASIC5.54□□□□□ -1.52
LDLRP01130 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC5.54□□□□□ -1.52
LDLRP01130 AC096775.1-201ENST00000437724 448 ntBASIC5.54□□□□□ -1.52
LDLRP01130 VN1R110P-201ENST00000438988 971 ntBASIC5.54□□□□□ -1.52
LDLRP01130 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.54□□□□□ -1.52
LDLRP01130 RPS23P9-201ENST00000448848 438 ntBASIC5.54□□□□□ -1.52
LDLRP01130 RPL31P53-201ENST00000457065 348 ntBASIC5.54□□□□□ -1.52
LDLRP01130 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.54□□□□□ -1.52
LDLRP01130 AC091544.1-201ENST00000484702 348 ntBASIC5.54□□□□□ -1.52
LDLRP01130 RWDD4P1-201ENST00000488019 565 ntBASIC5.54□□□□□ -1.52
LDLRP01130 UBE2D3-217ENST00000504211 578 ntTSL 2 BASIC5.54□□□□□ -1.52
LDLRP01130 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC5.54□□□□□ -1.52
LDLRP01130 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC5.54□□□□□ -1.52
LDLRP01130 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC5.54□□□□□ -1.52
LDLRP01130 RNA5SP34-201ENST00000516887 130 ntBASIC5.54□□□□□ -1.52
LDLRP01130 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.54□□□□□ -1.52
LDLRP01130 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.54□□□□□ -1.52
LDLRP01130 AP000648.1-201ENST00000529682 397 ntBASIC5.54□□□□□ -1.52
LDLRP01130 AC027026.1-201ENST00000532323 742 ntBASIC5.54□□□□□ -1.52
LDLRP01130 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC5.54□□□□□ -1.52
LDLRP01130 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.54□□□□□ -1.52
LDLRP01130 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC5.54□□□□□ -1.52
LDLRP01130 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.54□□□□□ -1.52
LDLRP01130 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC5.54□□□□□ -1.52
LDLRP01130 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.54□□□□□ -1.52
LDLRP01130 AP005119.1-201ENST00000580956 292 ntBASIC5.54□□□□□ -1.52
LDLRP01130 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.54□□□□□ -1.52
LDLRP01130 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.54□□□□□ -1.52
LDLRP01130 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.54□□□□□ -1.52
LDLRP01130 AL031601.1-201ENST00000605702 394 ntBASIC5.54□□□□□ -1.52
LDLRP01130 AC073575.2-201ENST00000614212 627 ntBASIC5.54□□□□□ -1.52
LDLRP01130 AC016769.4-201ENST00000616893 535 ntBASIC5.54□□□□□ -1.52
LDLRP01130 AC118658.2-201ENST00000618697 459 ntBASIC5.54□□□□□ -1.52
LDLRP01130 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.54□□□□□ -1.52
LDLRP01130 AC097063.1-201ENST00000426714 1797 ntBASIC5.54□□□□□ -1.52
LDLRP01130 AL161912.4-201ENST00000623889 2468 ntBASIC5.54□□□□□ -1.52
LDLRP01130 AP001029.2-203ENST00000589795 4910 ntBASIC5.54□□□□□ -1.52
LDLRP01130 AF287957.1-201ENST00000607368 1595 ntBASIC5.54□□□□□ -1.52
LDLRP01130 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
LDLRP01130 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
LDLRP01130 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.54□□□□□ -1.52
LDLRP01130 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.53□□□□□ -1.52
LDLRP01130 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LDLRP01130 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LDLRP01130 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.53□□□□□ -1.52
LDLRP01130 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
LDLRP01130 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LDLRP01130 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LDLRP01130 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.53□□□□□ -1.52
LDLRP01130 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LDLRP01130 FAS-203ENST00000355279 983 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LDLRP01130 RNA5SP132-201ENST00000364725 118 ntBASIC5.53□□□□□ -1.52
LDLRP01130 RNA5SP211-201ENST00000365516 117 ntBASIC5.53□□□□□ -1.52
LDLRP01130 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.53□□□□□ -1.52
LDLRP01130 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.53□□□□□ -1.52
LDLRP01130 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC5.53□□□□□ -1.52
LDLRP01130 FTLP19-201ENST00000433300 394 ntBASIC5.53□□□□□ -1.52
LDLRP01130 NDUFA5P1-201ENST00000433858 341 ntBASIC5.53□□□□□ -1.52
LDLRP01130 SUMO2P3-201ENST00000438311 288 ntBASIC5.53□□□□□ -1.52
LDLRP01130 AL512605.1-202ENST00000441919 381 ntBASIC5.53□□□□□ -1.52
LDLRP01130 AL359955.2-201ENST00000445380 353 ntBASIC5.53□□□□□ -1.52
LDLRP01130 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC5.53□□□□□ -1.52
LDLRP01130 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.53□□□□□ -1.52
LDLRP01130 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.53□□□□□ -1.52
LDLRP01130 AP006216.2-201ENST00000457746 333 ntTSL 5 BASIC5.53□□□□□ -1.52
LDLRP01130 AC016687.1-201ENST00000482574 353 ntBASIC5.53□□□□□ -1.52
LDLRP01130 RPL37AP8-201ENST00000494116 276 ntBASIC5.53□□□□□ -1.52
LDLRP01130 AC012629.1-201ENST00000503953 342 ntTSL 3 BASIC5.53□□□□□ -1.52
LDLRP01130 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LDLRP01130 OR56A7P-201ENST00000524865 941 ntBASIC5.53□□□□□ -1.52
LDLRP01130 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.53□□□□□ -1.52
LDLRP01130 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms