Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.32□□□□□ -1.56
NKX2-2O95096 CBX3P2-202ENST00000583365 535 ntBASIC5.32□□□□□ -1.56
NKX2-2O95096 MIR4420-201ENST00000583944 77 ntBASIC5.32□□□□□ -1.56
NKX2-2O95096 AC067773.1-201ENST00000603284 1094 ntBASIC5.32□□□□□ -1.56
NKX2-2O95096 MIR6071-201ENST00000616741 78 ntBASIC5.32□□□□□ -1.56
NKX2-2O95096 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.32□□□□□ -1.56
NKX2-2O95096 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.32□□□□□ -1.56
NKX2-2O95096 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.32□□□□□ -1.56
NKX2-2O95096 FRG1DP-201ENST00000635586 771 ntBASIC5.32□□□□□ -1.56
NKX2-2O95096 OR8G3P-202ENST00000641572 1255 ntBASIC5.32□□□□□ -1.56
NKX2-2O95096 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NKX2-2O95096 ZNF90P1-201ENST00000480493 1951 ntBASIC5.32□□□□□ -1.56
NKX2-2O95096 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.32□□□□□ -1.56
NKX2-2O95096 AC007342.7-201ENST00000624610 2337 ntBASIC5.32□□□□□ -1.56
NKX2-2O95096 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.32□□□□□ -1.56
NKX2-2O95096 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NKX2-2O95096 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.32□□□□□ -1.56
NKX2-2O95096 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.32□□□□□ -1.56
NKX2-2O95096 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
NKX2-2O95096 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
NKX2-2O95096 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.32□□□□□ -1.56
NKX2-2O95096 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NKX2-2O95096 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC5.31□□□□□ -1.56
NKX2-2O95096 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NKX2-2O95096 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NKX2-2O95096 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
NKX2-2O95096 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NKX2-2O95096 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.31□□□□□ -1.56
NKX2-2O95096 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NKX2-2O95096 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.31□□□□□ -1.56
NKX2-2O95096 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
NKX2-2O95096 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
NKX2-2O95096 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NKX2-2O95096 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
NKX2-2O95096 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NKX2-2O95096 MT-RNR2-201ENST00000387347 1559 ntBASIC5.31□□□□□ -1.56
NKX2-2O95096 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NKX2-2O95096 FUNDC2P3-201ENST00000334716 533 ntBASIC5.31□□□□□ -1.56
NKX2-2O95096 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
NKX2-2O95096 AL159987.1-201ENST00000347911 293 ntBASIC5.31□□□□□ -1.56
NKX2-2O95096 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NKX2-2O95096 RNU6-1320P-201ENST00000390838 107 ntBASIC5.31□□□□□ -1.56
NKX2-2O95096 RNU6-1269P-201ENST00000391139 107 ntBASIC5.31□□□□□ -1.56
NKX2-2O95096 RN7SKP240-201ENST00000410583 375 ntBASIC5.31□□□□□ -1.56
NKX2-2O95096 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC5.31□□□□□ -1.56
NKX2-2O95096 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.31□□□□□ -1.56
NKX2-2O95096 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.31□□□□□ -1.56
NKX2-2O95096 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC5.31□□□□□ -1.56
NKX2-2O95096 RNU6-599P-201ENST00000459383 107 ntBASIC5.31□□□□□ -1.56
NKX2-2O95096 RNU6-1193P-201ENST00000459461 107 ntBASIC5.31□□□□□ -1.56
NKX2-2O95096 AC108751.3-201ENST00000461814 1020 ntBASIC5.31□□□□□ -1.56
NKX2-2O95096 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.31□□□□□ -1.56
NKX2-2O95096 AC008410.1-201ENST00000483777 339 ntBASIC5.31□□□□□ -1.56
NKX2-2O95096 AC092902.1-201ENST00000486999 259 ntBASIC5.31□□□□□ -1.56
NKX2-2O95096 RPL32P33-201ENST00000487023 394 ntBASIC5.31□□□□□ -1.56
NKX2-2O95096 DUTP1-201ENST00000493631 470 ntBASIC5.31□□□□□ -1.56
NKX2-2O95096 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC5.31□□□□□ -1.56
NKX2-2O95096 NENFP3-201ENST00000503735 313 ntBASIC5.31□□□□□ -1.56
NKX2-2O95096 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC5.31□□□□□ -1.56
NKX2-2O95096 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NKX2-2O95096 SCARNA6.1-201ENST00000516989 238 ntBASIC5.31□□□□□ -1.56
NKX2-2O95096 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC5.31□□□□□ -1.56
NKX2-2O95096 AC021678.3-201ENST00000517893 476 ntBASIC5.31□□□□□ -1.56
NKX2-2O95096 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC5.31□□□□□ -1.56
NKX2-2O95096 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC5.31□□□□□ -1.56
NKX2-2O95096 AC109635.6-201ENST00000525487 1113 ntBASIC5.31□□□□□ -1.56
NKX2-2O95096 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC5.31□□□□□ -1.56
NKX2-2O95096 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC5.31□□□□□ -1.56
NKX2-2O95096 ATPAF1-210ENST00000532925 998 ntTSL 2 BASIC5.31□□□□□ -1.56
NKX2-2O95096 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.31□□□□□ -1.56
NKX2-2O95096 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.31□□□□□ -1.56
NKX2-2O95096 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.31□□□□□ -1.56
NKX2-2O95096 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.31□□□□□ -1.56
NKX2-2O95096 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC5.31□□□□□ -1.56
NKX2-2O95096 AC092121.1-201ENST00000569452 202 ntBASIC5.31□□□□□ -1.56
NKX2-2O95096 AC079315.1-201ENST00000602952 623 ntBASIC5.31□□□□□ -1.56
NKX2-2O95096 RNU6-368P-201ENST00000620928 107 ntBASIC5.31□□□□□ -1.56
NKX2-2O95096 RNU6-538P-201ENST00000622329 107 ntBASIC5.31□□□□□ -1.56
NKX2-2O95096 C8orf89-203ENST00000625134 507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
NKX2-2O95096 AC129915.3-201ENST00000634128 948 ntBASIC5.31□□□□□ -1.56
NKX2-2O95096 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.31□□□□□ -1.56
NKX2-2O95096 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NKX2-2O95096 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
NKX2-2O95096 WDR95P-201ENST00000425638 1542 ntBASIC5.31□□□□□ -1.56
NKX2-2O95096 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
NKX2-2O95096 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.31□□□□□ -1.56
NKX2-2O95096 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NKX2-2O95096 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
NKX2-2O95096 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.31□□□□□ -1.56
NKX2-2O95096 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.31□□□□□ -1.56
NKX2-2O95096 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
NKX2-2O95096 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.3□□□□□ -1.56
NKX2-2O95096 AL355488.2-201ENST00000609909 2850 ntBASIC5.3□□□□□ -1.56
NKX2-2O95096 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
NKX2-2O95096 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.3□□□□□ -1.56
NKX2-2O95096 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.3□□□□□ -1.56
NKX2-2O95096 AL136520.1-201ENST00000600311 1322 ntBASIC5.3□□□□□ -1.56
NKX2-2O95096 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
NKX2-2O95096 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.3□□□□□ -1.56
NKX2-2O95096 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms