Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
RNF40O75150 CEP57L1-214ENST00000521277 3832 ntTSL 2 BASIC8.34□□□□□ -1.07
RNF40O75150 IFI44-201ENST00000370747 1687 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
RNF40O75150 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
RNF40O75150 UNC5D-201ENST00000287272 8662 ntTSL 5 BASIC8.34□□□□□ -1.07
RNF40O75150 ZNF345-202ENST00000420450 1971 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
RNF40O75150 PROM1-210ENST00000510224 4006 ntAPPRIS P3 TSL 5 BASIC8.34□□□□□ -1.07
RNF40O75150 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
RNF40O75150 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC8.34□□□□□ -1.07
RNF40O75150 ENSAP3-201ENST00000312710 333 ntBASIC8.34□□□□□ -1.07
RNF40O75150 DEFB124-201ENST00000317676 216 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
RNF40O75150 MIR369-201ENST00000362155 70 ntBASIC8.34□□□□□ -1.07
RNF40O75150 Y_RNA.193-201ENST00000363979 102 ntBASIC8.34□□□□□ -1.07
RNF40O75150 MXI1-204ENST00000369612 879 ntTSL 3 BASIC8.34□□□□□ -1.07
RNF40O75150 SNORA30-201ENST00000384028 129 ntBASIC8.34□□□□□ -1.07
RNF40O75150 Y_RNA.481-201ENST00000384373 102 ntBASIC8.34□□□□□ -1.07
RNF40O75150 GPX2-201ENST00000389614 990 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
RNF40O75150 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC8.34□□□□□ -1.07
RNF40O75150 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC8.34□□□□□ -1.07
RNF40O75150 CBX3P6-201ENST00000430257 527 ntBASIC8.34□□□□□ -1.07
RNF40O75150 AL606752.1-201ENST00000435442 666 ntBASIC8.34□□□□□ -1.07
RNF40O75150 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC8.34□□□□□ -1.07
RNF40O75150 CD59-206ENST00000445143 825 ntAPPRIS P2 TSL 3 BASIC8.34□□□□□ -1.07
RNF40O75150 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC8.34□□□□□ -1.07
RNF40O75150 NUTF2P4-201ENST00000458353 381 ntBASIC8.34□□□□□ -1.07
RNF40O75150 AC004801.2-201ENST00000468202 779 ntBASIC8.34□□□□□ -1.07
RNF40O75150 AL928654.1-201ENST00000476081 354 ntBASIC8.34□□□□□ -1.07
RNF40O75150 AF305872.1-201ENST00000485217 471 ntBASIC8.34□□□□□ -1.07
RNF40O75150 PAQR9-AS1-202ENST00000493825 576 ntTSL 2 BASIC8.34□□□□□ -1.07
RNF40O75150 AC008799.1-201ENST00000495909 457 ntBASIC8.34□□□□□ -1.07
RNF40O75150 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC8.34□□□□□ -1.07
RNF40O75150 AC023886.1-201ENST00000506057 685 ntTSL 3 BASIC8.34□□□□□ -1.07
RNF40O75150 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC8.34□□□□□ -1.07
RNF40O75150 AC114801.1-201ENST00000512633 297 ntBASIC8.34□□□□□ -1.07
RNF40O75150 KRT18P54-201ENST00000513396 748 ntBASIC8.34□□□□□ -1.07
RNF40O75150 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC8.34□□□□□ -1.07
RNF40O75150 AC107959.3-202ENST00000523806 450 ntTSL 5 BASIC8.34□□□□□ -1.07
RNF40O75150 LRP1-AS-201ENST00000554476 325 ntTSL 3 BASIC8.34□□□□□ -1.07
RNF40O75150 AC022558.2-201ENST00000566841 754 ntTSL 5 BASIC8.34□□□□□ -1.07
RNF40O75150 DYNLL1P1-201ENST00000595442 269 ntBASIC8.34□□□□□ -1.07
RNF40O75150 OR7A18P-201ENST00000600416 277 ntBASIC8.34□□□□□ -1.07
RNF40O75150 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC8.34□□□□□ -1.07
RNF40O75150 AC012507.3-201ENST00000603556 477 ntBASIC8.34□□□□□ -1.07
RNF40O75150 AC244196.3-201ENST00000614171 374 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
RNF40O75150 AC009248.2-201ENST00000619826 254 ntBASIC8.34□□□□□ -1.07
RNF40O75150 AC068831.8-201ENST00000620171 435 ntBASIC8.34□□□□□ -1.07
RNF40O75150 AC130448.2-201ENST00000624082 374 ntBASIC8.34□□□□□ -1.07
RNF40O75150 SLC13A3-202ENST00000290317 3994 ntTSL 5 BASIC8.34□□□□□ -1.07
RNF40O75150 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC8.34□□□□□ -1.07
RNF40O75150 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
RNF40O75150 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC8.34□□□□□ -1.07
RNF40O75150 CLRN1-AS1-202ENST00000476886 2223 ntTSL 2 BASIC8.34□□□□□ -1.07
RNF40O75150 AC119674.1-202ENST00000641333 1860 ntBASIC8.34□□□□□ -1.07
RNF40O75150 SULT1C2-202ENST00000326853 2828 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
RNF40O75150 OSBPL6-202ENST00000315022 2999 ntTSL 2 BASIC8.34□□□□□ -1.08
RNF40O75150 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
RNF40O75150 ZNF540-206ENST00000589117 2349 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.08
RNF40O75150 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC8.34□□□□□ -1.08
RNF40O75150 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC8.34□□□□□ -1.08
RNF40O75150 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
RNF40O75150 TRIM6-202ENST00000380097 3403 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
RNF40O75150 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC8.33□□□□□ -1.08
RNF40O75150 LINC01829-202ENST00000433133 2100 ntTSL 2 BASIC8.33□□□□□ -1.08
RNF40O75150 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC8.33□□□□□ -1.08
RNF40O75150 AC011447.6-201ENST00000623510 2598 ntBASIC8.33□□□□□ -1.08
RNF40O75150 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RNF40O75150 ZNF10-201ENST00000248211 4441 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RNF40O75150 MFSD8-218ENST00000641186 4448 ntBASIC8.33□□□□□ -1.08
RNF40O75150 CHD6-201ENST00000309279 1635 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
RNF40O75150 DHX35-201ENST00000252011 3325 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RNF40O75150 AFF1-211ENST00000544085 3644 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
RNF40O75150 HHIP-201ENST00000296575 10072 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RNF40O75150 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC8.33□□□□□ -1.08
RNF40O75150 OR11H13P-201ENST00000359695 979 ntBASIC8.33□□□□□ -1.08
RNF40O75150 RN7SKP208-201ENST00000365474 361 ntBASIC8.33□□□□□ -1.08
RNF40O75150 RN7SKP1-201ENST00000365525 307 ntBASIC8.33□□□□□ -1.08
RNF40O75150 MUC1-206ENST00000368390 804 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
RNF40O75150 MUC1-209ENST00000368396 516 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
RNF40O75150 MUC1-210ENST00000368398 729 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
RNF40O75150 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC8.33□□□□□ -1.08
RNF40O75150 MTRF1-203ENST00000379480 2185 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
RNF40O75150 PDHA1-202ENST00000379804 709 ntTSL 2 BASIC8.33□□□□□ -1.08
RNF40O75150 AMELY-202ENST00000383036 621 ntTSL 5 BASIC8.33□□□□□ -1.08
RNF40O75150 RNU6-723P-201ENST00000383973 107 ntBASIC8.33□□□□□ -1.08
RNF40O75150 MIR142-201ENST00000384835 87 ntBASIC8.33□□□□□ -1.08
RNF40O75150 RNA5SP297-201ENST00000391029 113 ntBASIC8.33□□□□□ -1.08
RNF40O75150 RPL23AP29-201ENST00000397284 453 ntBASIC8.33□□□□□ -1.08
RNF40O75150 AL139805.1-201ENST00000407837 289 ntBASIC8.33□□□□□ -1.08
RNF40O75150 RN7SKP59-201ENST00000410520 314 ntBASIC8.33□□□□□ -1.08
RNF40O75150 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC8.33□□□□□ -1.08
RNF40O75150 AL022334.1-201ENST00000417397 1726 ntBASIC8.33□□□□□ -1.08
RNF40O75150 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC8.33□□□□□ -1.08
RNF40O75150 AL109924.2-201ENST00000419800 934 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
RNF40O75150 AC007394.1-201ENST00000421941 531 ntBASIC8.33□□□□□ -1.08
RNF40O75150 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC8.33□□□□□ -1.08
RNF40O75150 AL445669.1-201ENST00000426743 755 ntBASIC8.33□□□□□ -1.08
RNF40O75150 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC8.33□□□□□ -1.08
RNF40O75150 PSMD8P1-201ENST00000436275 769 ntBASIC8.33□□□□□ -1.08
RNF40O75150 AC002553.1-201ENST00000442828 802 ntBASIC8.33□□□□□ -1.08
RNF40O75150 ANKRD26P2-201ENST00000445530 1710 ntBASIC8.33□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms