Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 AC122718.2-201ENST00000505325 591 ntBASIC5.41□□□□□ -1.54
SHOX2O60902 AC073358.1-201ENST00000505671 684 ntBASIC5.41□□□□□ -1.54
SHOX2O60902 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.41□□□□□ -1.54
SHOX2O60902 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.41□□□□□ -1.54
SHOX2O60902 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.41□□□□□ -1.54
SHOX2O60902 AC011500.1-201ENST00000601963 469 ntBASIC5.41□□□□□ -1.54
SHOX2O60902 AC018695.5-201ENST00000605872 315 ntBASIC5.41□□□□□ -1.54
SHOX2O60902 SNORD91B-202ENST00000608459 222 ntBASIC5.41□□□□□ -1.54
SHOX2O60902 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.41□□□□□ -1.54
SHOX2O60902 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.41□□□□□ -1.54
SHOX2O60902 AL353684.1-201ENST00000622677 1120 ntBASIC5.41□□□□□ -1.54
SHOX2O60902 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.41□□□□□ -1.54
SHOX2O60902 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.41□□□□□ -1.54
SHOX2O60902 AL596275.2-204ENST00000641628 552 ntBASIC5.41□□□□□ -1.54
SHOX2O60902 AL596275.2-206ENST00000641957 626 ntBASIC5.41□□□□□ -1.54
SHOX2O60902 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC5.41□□□□□ -1.54
SHOX2O60902 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
SHOX2O60902 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SHOX2O60902 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SHOX2O60902 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
SHOX2O60902 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
SHOX2O60902 SMG1P4-204ENST00000523028 4131 ntBASIC5.41□□□□□ -1.54
SHOX2O60902 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
SHOX2O60902 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
SHOX2O60902 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.54
SHOX2O60902 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
SHOX2O60902 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.4□□□□□ -1.54
SHOX2O60902 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SHOX2O60902 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC5.4□□□□□ -1.54
SHOX2O60902 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.4□□□□□ -1.54
SHOX2O60902 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SHOX2O60902 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SHOX2O60902 PDE4D-205ENST00000360047 3122 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SHOX2O60902 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
SHOX2O60902 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SHOX2O60902 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
SHOX2O60902 MTCO1P7-201ENST00000419523 1542 ntBASIC5.4□□□□□ -1.54
SHOX2O60902 AC099654.3-201ENST00000447087 1546 ntBASIC5.4□□□□□ -1.54
SHOX2O60902 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.54
SHOX2O60902 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SHOX2O60902 RN7SKP38-201ENST00000410782 309 ntBASIC5.4□□□□□ -1.54
SHOX2O60902 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.4□□□□□ -1.54
SHOX2O60902 AL358176.3-201ENST00000420757 454 ntBASIC5.4□□□□□ -1.54
SHOX2O60902 RPL7AP51-201ENST00000422016 760 ntBASIC5.4□□□□□ -1.54
SHOX2O60902 AC092865.3-201ENST00000425390 1026 ntBASIC5.4□□□□□ -1.54
SHOX2O60902 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC5.4□□□□□ -1.54
SHOX2O60902 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC5.4□□□□□ -1.54
SHOX2O60902 AL353662.1-201ENST00000439099 327 ntBASIC5.4□□□□□ -1.54
SHOX2O60902 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.4□□□□□ -1.54
SHOX2O60902 LINC01370-202ENST00000445606 731 ntTSL 5 BASIC5.4□□□□□ -1.54
SHOX2O60902 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC5.4□□□□□ -1.54
SHOX2O60902 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SHOX2O60902 PPIAP7-201ENST00000454070 489 ntBASIC5.4□□□□□ -1.54
SHOX2O60902 AL035090.1-201ENST00000454835 332 ntBASIC5.4□□□□□ -1.54
SHOX2O60902 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.4□□□□□ -1.54
SHOX2O60902 AC092865.4-201ENST00000477936 615 ntBASIC5.4□□□□□ -1.54
SHOX2O60902 AC090686.1-201ENST00000481577 749 ntBASIC5.4□□□□□ -1.54
SHOX2O60902 AC113367.2-201ENST00000505749 160 ntBASIC5.4□□□□□ -1.54
SHOX2O60902 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SHOX2O60902 AC091819.1-201ENST00000518330 630 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
SHOX2O60902 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.4□□□□□ -1.54
SHOX2O60902 AP000620.1-201ENST00000527147 504 ntBASIC5.4□□□□□ -1.54
SHOX2O60902 TOMM20P1-201ENST00000534518 427 ntBASIC5.4□□□□□ -1.54
SHOX2O60902 LINC01234-204ENST00000550905 589 ntTSL 3 BASIC5.4□□□□□ -1.54
SHOX2O60902 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.4□□□□□ -1.54
SHOX2O60902 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.4□□□□□ -1.54
SHOX2O60902 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.4□□□□□ -1.54
SHOX2O60902 MIR4701-201ENST00000583094 63 ntBASIC5.4□□□□□ -1.54
SHOX2O60902 WBP1LP11-201ENST00000586141 328 ntBASIC5.4□□□□□ -1.54
SHOX2O60902 OSTC-205ENST00000613215 876 ntTSL 2 BASIC5.4□□□□□ -1.54
SHOX2O60902 AP003400.3-201ENST00000624904 346 ntBASIC5.4□□□□□ -1.54
SHOX2O60902 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SHOX2O60902 LINC01630-206ENST00000635103 4292 ntTSL 5 BASIC5.4□□□□□ -1.55
SHOX2O60902 UGT2B26P-201ENST00000508672 1613 ntBASIC5.4□□□□□ -1.55
SHOX2O60902 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.4□□□□□ -1.55
SHOX2O60902 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
SHOX2O60902 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.4□□□□□ -1.55
SHOX2O60902 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC5.4□□□□□ -1.55
SHOX2O60902 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC5.4□□□□□ -1.55
SHOX2O60902 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SHOX2O60902 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SHOX2O60902 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SHOX2O60902 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHOX2O60902 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHOX2O60902 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SHOX2O60902 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.39□□□□□ -1.55
SHOX2O60902 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.39□□□□□ -1.55
SHOX2O60902 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHOX2O60902 AC097461.1-201ENST00000568928 2821 ntBASIC5.39□□□□□ -1.55
SHOX2O60902 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHOX2O60902 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SHOX2O60902 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
SHOX2O60902 AL034370.1-201ENST00000397254 1590 ntBASIC5.39□□□□□ -1.55
SHOX2O60902 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SHOX2O60902 MRRF-207ENST00000373729 870 ntTSL 3 BASIC5.39□□□□□ -1.55
SHOX2O60902 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SHOX2O60902 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5.39□□□□□ -1.55
SHOX2O60902 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.39□□□□□ -1.55
SHOX2O60902 RPSAP32-201ENST00000432681 526 ntBASIC5.39□□□□□ -1.55
SHOX2O60902 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 125.6 ms