Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC5.09□□□□□ -1.59
UPK1AO00322 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.09□□□□□ -1.59
UPK1AO00322 OR8G3P-201ENST00000533406 921 ntBASIC5.09□□□□□ -1.59
UPK1AO00322 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.09□□□□□ -1.59
UPK1AO00322 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.09□□□□□ -1.59
UPK1AO00322 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.09□□□□□ -1.59
UPK1AO00322 MIR3614-201ENST00000581261 86 ntBASIC5.09□□□□□ -1.59
UPK1AO00322 AC010487.1-201ENST00000594408 1172 ntBASIC5.09□□□□□ -1.59
UPK1AO00322 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
UPK1AO00322 FO393422.1-201ENST00000603908 708 ntBASIC5.09□□□□□ -1.59
UPK1AO00322 RNA5SP440-201ENST00000612665 119 ntBASIC5.09□□□□□ -1.59
UPK1AO00322 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.09□□□□□ -1.59
UPK1AO00322 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.09□□□□□ -1.59
UPK1AO00322 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.09□□□□□ -1.59
UPK1AO00322 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
UPK1AO00322 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.09□□□□□ -1.6
UPK1AO00322 HSPA8P14-201ENST00000552265 1805 ntBASIC5.09□□□□□ -1.6
UPK1AO00322 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
UPK1AO00322 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.09□□□□□ -1.6
UPK1AO00322 AC025574.1-201ENST00000554784 1653 ntBASIC5.08□□□□□ -1.6
UPK1AO00322 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
UPK1AO00322 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.08□□□□□ -1.6
UPK1AO00322 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
UPK1AO00322 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
UPK1AO00322 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
UPK1AO00322 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC5.08□□□□□ -1.6
UPK1AO00322 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
UPK1AO00322 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
UPK1AO00322 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
UPK1AO00322 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
UPK1AO00322 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.08□□□□□ -1.6
UPK1AO00322 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.08□□□□□ -1.6
UPK1AO00322 RPL21P67-201ENST00000402896 478 ntBASIC5.08□□□□□ -1.6
UPK1AO00322 GABARAPL3-201ENST00000412799 354 ntBASIC5.08□□□□□ -1.6
UPK1AO00322 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.08□□□□□ -1.6
UPK1AO00322 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
UPK1AO00322 AKR1B10P1-201ENST00000425765 942 ntBASIC5.08□□□□□ -1.6
UPK1AO00322 AC079807.1-201ENST00000429993 481 ntBASIC5.08□□□□□ -1.6
UPK1AO00322 AL390119.1-201ENST00000440329 312 ntBASIC5.08□□□□□ -1.6
UPK1AO00322 AP000281.1-201ENST00000444036 316 ntBASIC5.08□□□□□ -1.6
UPK1AO00322 NPM1P19-201ENST00000450070 712 ntBASIC5.08□□□□□ -1.6
UPK1AO00322 YWHAEP1-201ENST00000453697 763 ntBASIC5.08□□□□□ -1.6
UPK1AO00322 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.08□□□□□ -1.6
UPK1AO00322 RPS27AP2-201ENST00000457576 465 ntBASIC5.08□□□□□ -1.6
UPK1AO00322 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
UPK1AO00322 PPIAP19-201ENST00000486414 492 ntBASIC5.08□□□□□ -1.6
UPK1AO00322 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.08□□□□□ -1.6
UPK1AO00322 RPS12P31-201ENST00000491419 398 ntBASIC5.08□□□□□ -1.6
UPK1AO00322 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
UPK1AO00322 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.08□□□□□ -1.6
UPK1AO00322 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.08□□□□□ -1.6
UPK1AO00322 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.08□□□□□ -1.6
UPK1AO00322 AC090568.1-201ENST00000509499 856 ntBASIC5.08□□□□□ -1.6
UPK1AO00322 MTND6P2-201ENST00000512226 524 ntBASIC5.08□□□□□ -1.6
UPK1AO00322 LINC02506-201ENST00000513211 734 ntTSL 3 BASIC5.08□□□□□ -1.6
UPK1AO00322 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.08□□□□□ -1.6
UPK1AO00322 TMEM97P2-201ENST00000517841 403 ntBASIC5.08□□□□□ -1.6
UPK1AO00322 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.08□□□□□ -1.6
UPK1AO00322 AC078878.1-201ENST00000539832 958 ntBASIC5.08□□□□□ -1.6
UPK1AO00322 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.08□□□□□ -1.6
UPK1AO00322 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.08□□□□□ -1.6
UPK1AO00322 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.08□□□□□ -1.6
UPK1AO00322 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.08□□□□□ -1.6
UPK1AO00322 AP001962.1-201ENST00000624114 559 ntBASIC5.08□□□□□ -1.6
UPK1AO00322 AC073869.10-201ENST00000642016 354 ntBASIC5.08□□□□□ -1.6
UPK1AO00322 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
UPK1AO00322 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
UPK1AO00322 ASAH2-204ENST00000447815 2311 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
UPK1AO00322 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
UPK1AO00322 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.08□□□□□ -1.6
UPK1AO00322 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
UPK1AO00322 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.07□□□□□ -1.6
UPK1AO00322 AP005432.1-201ENST00000580891 3485 ntBASIC5.07□□□□□ -1.6
UPK1AO00322 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.07□□□□□ -1.6
UPK1AO00322 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
UPK1AO00322 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.07□□□□□ -1.6
UPK1AO00322 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.07□□□□□ -1.6
UPK1AO00322 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.07□□□□□ -1.6
UPK1AO00322 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.07□□□□□ -1.6
UPK1AO00322 AL353796.1-201ENST00000561542 3241 ntBASIC5.07□□□□□ -1.6
UPK1AO00322 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC5.07□□□□□ -1.6
UPK1AO00322 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
UPK1AO00322 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
UPK1AO00322 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
UPK1AO00322 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
UPK1AO00322 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
UPK1AO00322 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
UPK1AO00322 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
UPK1AO00322 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.07□□□□□ -1.6
UPK1AO00322 DBIP1-201ENST00000401435 260 ntBASIC5.07□□□□□ -1.6
UPK1AO00322 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
UPK1AO00322 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
UPK1AO00322 SNORA11.5-201ENST00000408163 128 ntBASIC5.07□□□□□ -1.6
UPK1AO00322 RN7SKP16-201ENST00000410180 299 ntBASIC5.07□□□□□ -1.6
UPK1AO00322 RN7SKP286-201ENST00000410894 299 ntBASIC5.07□□□□□ -1.6
UPK1AO00322 Z93019.1-201ENST00000416450 973 ntBASIC5.07□□□□□ -1.6
UPK1AO00322 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.07□□□□□ -1.6
UPK1AO00322 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.07□□□□□ -1.6
UPK1AO00322 RPL12P17-201ENST00000432393 498 ntBASIC5.07□□□□□ -1.6
UPK1AO00322 PCNPP2-201ENST00000441651 455 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms