Protein–RNA interactions for Protein: A6NDA9

LRIT2, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT2A6NDA9 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
LRIT2A6NDA9 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LRIT2A6NDA9 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LRIT2A6NDA9 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.22□□□□□ -1.57
LRIT2A6NDA9 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
LRIT2A6NDA9 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
LRIT2A6NDA9 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.21□□□□□ -1.57
LRIT2A6NDA9 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
LRIT2A6NDA9 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
LRIT2A6NDA9 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LRIT2A6NDA9 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.21□□□□□ -1.58
LRIT2A6NDA9 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LRIT2A6NDA9 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LRIT2A6NDA9 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
LRIT2A6NDA9 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LRIT2A6NDA9 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.21□□□□□ -1.58
LRIT2A6NDA9 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LRIT2A6NDA9 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
LRIT2A6NDA9 RN7SKP81-201ENST00000365603 331 ntBASIC5.21□□□□□ -1.58
LRIT2A6NDA9 SNORD56.6-201ENST00000384569 71 ntBASIC5.21□□□□□ -1.58
LRIT2A6NDA9 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.21□□□□□ -1.58
LRIT2A6NDA9 AL389925.1-201ENST00000432257 728 ntBASIC5.21□□□□□ -1.58
LRIT2A6NDA9 AC012075.1-201ENST00000436549 580 ntBASIC5.21□□□□□ -1.58
LRIT2A6NDA9 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.21□□□□□ -1.58
LRIT2A6NDA9 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.21□□□□□ -1.58
LRIT2A6NDA9 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC5.21□□□□□ -1.58
LRIT2A6NDA9 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.21□□□□□ -1.58
LRIT2A6NDA9 RN7SL717P-201ENST00000478343 297 ntBASIC5.21□□□□□ -1.58
LRIT2A6NDA9 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LRIT2A6NDA9 NPM1P28-201ENST00000492269 840 ntBASIC5.21□□□□□ -1.58
LRIT2A6NDA9 RN7SL466P-201ENST00000497546 295 ntBASIC5.21□□□□□ -1.58
LRIT2A6NDA9 AC090638.1-201ENST00000498296 909 ntBASIC5.21□□□□□ -1.58
LRIT2A6NDA9 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC5.21□□□□□ -1.58
LRIT2A6NDA9 RN7SKP99-201ENST00000517028 307 ntBASIC5.21□□□□□ -1.58
LRIT2A6NDA9 AC025857.1-201ENST00000525252 377 ntBASIC5.21□□□□□ -1.58
LRIT2A6NDA9 AC130364.2-201ENST00000528639 604 ntBASIC5.21□□□□□ -1.58
LRIT2A6NDA9 AC078878.1-201ENST00000539832 958 ntBASIC5.21□□□□□ -1.58
LRIT2A6NDA9 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.21□□□□□ -1.58
LRIT2A6NDA9 SNORD95-201ENST00000579879 68 ntBASIC5.21□□□□□ -1.58
LRIT2A6NDA9 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.21□□□□□ -1.58
LRIT2A6NDA9 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.21□□□□□ -1.58
LRIT2A6NDA9 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.21□□□□□ -1.58
LRIT2A6NDA9 AC010245.2-201ENST00000606908 1167 ntBASIC5.21□□□□□ -1.58
LRIT2A6NDA9 AC007786.3-201ENST00000615154 596 ntBASIC5.21□□□□□ -1.58
LRIT2A6NDA9 AC021766.1-201ENST00000624404 741 ntBASIC5.21□□□□□ -1.58
LRIT2A6NDA9 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.21□□□□□ -1.58
LRIT2A6NDA9 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
LRIT2A6NDA9 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
LRIT2A6NDA9 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
LRIT2A6NDA9 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.21□□□□□ -1.58
LRIT2A6NDA9 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LRIT2A6NDA9 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LRIT2A6NDA9 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
LRIT2A6NDA9 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
LRIT2A6NDA9 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LRIT2A6NDA9 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
LRIT2A6NDA9 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LRIT2A6NDA9 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
LRIT2A6NDA9 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.2□□□□□ -1.58
LRIT2A6NDA9 AL360270.2-201ENST00000562952 5985 ntBASIC5.2□□□□□ -1.58
LRIT2A6NDA9 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.2□□□□□ -1.58
LRIT2A6NDA9 GRAMD1C-208ENST00000472026 1876 ntTSL 2 BASIC5.2□□□□□ -1.58
LRIT2A6NDA9 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.2□□□□□ -1.58
LRIT2A6NDA9 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.2□□□□□ -1.58
LRIT2A6NDA9 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.2□□□□□ -1.58
LRIT2A6NDA9 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
LRIT2A6NDA9 RNA5SP319-201ENST00000362768 119 ntBASIC5.2□□□□□ -1.58
LRIT2A6NDA9 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
LRIT2A6NDA9 SNORA16A-201ENST00000384342 137 ntBASIC5.2□□□□□ -1.58
LRIT2A6NDA9 PPIAP9-201ENST00000403866 498 ntBASIC5.2□□□□□ -1.58
LRIT2A6NDA9 AC017078.1-201ENST00000416146 368 ntBASIC5.2□□□□□ -1.58
LRIT2A6NDA9 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.2□□□□□ -1.58
LRIT2A6NDA9 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.2□□□□□ -1.58
LRIT2A6NDA9 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.2□□□□□ -1.58
LRIT2A6NDA9 OR52Y1P-201ENST00000452418 828 ntBASIC5.2□□□□□ -1.58
LRIT2A6NDA9 RANP1-206ENST00000455094 651 ntBASIC5.2□□□□□ -1.58
LRIT2A6NDA9 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC5.2□□□□□ -1.58
LRIT2A6NDA9 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC5.2□□□□□ -1.58
LRIT2A6NDA9 RPSAP39-201ENST00000467439 883 ntBASIC5.2□□□□□ -1.58
LRIT2A6NDA9 MTND6P2-201ENST00000512226 524 ntBASIC5.2□□□□□ -1.58
LRIT2A6NDA9 AC008676.3-201ENST00000521237 435 ntBASIC5.2□□□□□ -1.58
LRIT2A6NDA9 IGKV3D-34-201ENST00000522638 302 ntBASIC5.2□□□□□ -1.58
LRIT2A6NDA9 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.2□□□□□ -1.58
LRIT2A6NDA9 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.2□□□□□ -1.58
LRIT2A6NDA9 AC019322.1-201ENST00000571869 389 ntBASIC5.2□□□□□ -1.58
LRIT2A6NDA9 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC5.2□□□□□ -1.58
LRIT2A6NDA9 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.2□□□□□ -1.58
LRIT2A6NDA9 AC010487.1-201ENST00000594408 1172 ntBASIC5.2□□□□□ -1.58
LRIT2A6NDA9 AL589674.2-201ENST00000604304 337 ntBASIC5.2□□□□□ -1.58
LRIT2A6NDA9 AC241377.1-201ENST00000619797 406 ntBASIC5.2□□□□□ -1.58
LRIT2A6NDA9 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.2□□□□□ -1.58
LRIT2A6NDA9 AP000550.3-201ENST00000637734 379 ntBASIC5.2□□□□□ -1.58
LRIT2A6NDA9 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LRIT2A6NDA9 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
LRIT2A6NDA9 AC100757.1-201ENST00000616872 1835 ntBASIC5.2□□□□□ -1.58
LRIT2A6NDA9 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
LRIT2A6NDA9 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
LRIT2A6NDA9 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
LRIT2A6NDA9 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.2□□□□□ -1.58
LRIT2A6NDA9 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 115 ms