Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.15□□□□□ -1.42
SHISA3A0PJX4 RN7SKP31-201ENST00000516354 278 ntBASIC6.15□□□□□ -1.42
SHISA3A0PJX4 AC008802.1-201ENST00000519121 791 ntBASIC6.15□□□□□ -1.42
SHISA3A0PJX4 EEF1B2P2-201ENST00000519625 676 ntBASIC6.15□□□□□ -1.42
SHISA3A0PJX4 AC084337.1-201ENST00000524809 686 ntBASIC6.15□□□□□ -1.42
SHISA3A0PJX4 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC6.15□□□□□ -1.42
SHISA3A0PJX4 GTF2IP22-201ENST00000554443 182 ntBASIC6.15□□□□□ -1.42
SHISA3A0PJX4 AC009119.1-204ENST00000561599 564 ntTSL 4 BASIC6.15□□□□□ -1.42
SHISA3A0PJX4 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC6.15□□□□□ -1.42
SHISA3A0PJX4 AC099518.1-201ENST00000568032 841 ntTSL 3 BASIC6.15□□□□□ -1.42
SHISA3A0PJX4 AC067852.5-201ENST00000589299 310 ntBASIC6.15□□□□□ -1.42
SHISA3A0PJX4 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC6.15□□□□□ -1.42
SHISA3A0PJX4 AC093063.1-201ENST00000599317 363 ntBASIC6.15□□□□□ -1.42
SHISA3A0PJX4 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC6.15□□□□□ -1.42
SHISA3A0PJX4 AL135999.3-201ENST00000610501 812 ntBASIC6.15□□□□□ -1.42
SHISA3A0PJX4 AC135050.6-202ENST00000613584 392 ntBASIC6.15□□□□□ -1.42
SHISA3A0PJX4 AL353726.1-201ENST00000614041 1000 ntBASIC6.15□□□□□ -1.42
SHISA3A0PJX4 AC239809.3-218ENST00000616018 1023 ntTSL 5 BASIC6.15□□□□□ -1.42
SHISA3A0PJX4 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC6.15□□□□□ -1.42
SHISA3A0PJX4 DUXAP9-208ENST00000622815 614 ntBASIC6.15□□□□□ -1.42
SHISA3A0PJX4 AC073348.1-201ENST00000623002 331 ntBASIC6.15□□□□□ -1.42
SHISA3A0PJX4 AC120057.5-201ENST00000623840 154 ntBASIC6.15□□□□□ -1.42
SHISA3A0PJX4 SGO1-AS1-206ENST00000635369 442 ntTSL 5 BASIC6.15□□□□□ -1.42
SHISA3A0PJX4 AL590396.3-201ENST00000636334 300 ntBASIC6.15□□□□□ -1.42
SHISA3A0PJX4 AC119674.1-212ENST00000641155 993 ntBASIC6.15□□□□□ -1.42
SHISA3A0PJX4 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
SHISA3A0PJX4 DCAF13P3-201ENST00000561147 1334 ntBASIC6.15□□□□□ -1.43
SHISA3A0PJX4 TOR1AIP2-203ENST00000482587 7067 ntTSL 2 BASIC6.15□□□□□ -1.43
SHISA3A0PJX4 CHST12-201ENST00000258711 15979 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SHISA3A0PJX4 AMY1A-201ENST00000370083 1790 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SHISA3A0PJX4 HHLA2-201ENST00000357759 2666 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
SHISA3A0PJX4 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.43
SHISA3A0PJX4 GNE-205ENST00000539815 3657 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SHISA3A0PJX4 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SHISA3A0PJX4 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SHISA3A0PJX4 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SHISA3A0PJX4 ZNF507-203ENST00000544431 5764 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SHISA3A0PJX4 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC6.15□□□□□ -1.43
SHISA3A0PJX4 COX7B-203ENST00000481445 2471 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SHISA3A0PJX4 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.43
SHISA3A0PJX4 AL590763.1-201ENST00000398297 1545 ntBASIC6.15□□□□□ -1.43
SHISA3A0PJX4 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 SLC7A6-216ENST00000618043 6124 ntTSL 5 BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 PTPN14-201ENST00000366956 12985 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 KAT7-203ENST00000435742 3638 ntTSL 2 BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 Y_RNA.70-201ENST00000362886 110 ntBASIC6.14□□□□□ -1.43
SHISA3A0PJX4 RNA5SP448-201ENST00000363151 111 ntBASIC6.14□□□□□ -1.43
SHISA3A0PJX4 RNU5D-1-201ENST00000363299 116 ntBASIC6.14□□□□□ -1.43
SHISA3A0PJX4 SNORA72.1-201ENST00000363485 129 ntBASIC6.14□□□□□ -1.43
SHISA3A0PJX4 RN7SKP226-201ENST00000364912 300 ntBASIC6.14□□□□□ -1.43
SHISA3A0PJX4 RNA5SP172-201ENST00000365061 118 ntBASIC6.14□□□□□ -1.43
SHISA3A0PJX4 SNORA11C-201ENST00000408532 129 ntBASIC6.14□□□□□ -1.43
SHISA3A0PJX4 MIR1277-201ENST00000408536 78 ntBASIC6.14□□□□□ -1.43
SHISA3A0PJX4 RN7SKP161-201ENST00000411110 305 ntBASIC6.14□□□□□ -1.43
SHISA3A0PJX4 AL713922.1-201ENST00000416477 747 ntBASIC6.14□□□□□ -1.43
SHISA3A0PJX4 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 AC245054.1-201ENST00000420944 258 ntBASIC6.14□□□□□ -1.43
SHISA3A0PJX4 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 FMO7P-201ENST00000436045 768 ntBASIC6.14□□□□□ -1.43
SHISA3A0PJX4 HMGB1P31-201ENST00000437242 427 ntBASIC6.14□□□□□ -1.43
SHISA3A0PJX4 AL512593.1-201ENST00000444758 779 ntBASIC6.14□□□□□ -1.43
SHISA3A0PJX4 MTND6P5-201ENST00000448266 512 ntBASIC6.14□□□□□ -1.43
SHISA3A0PJX4 BX248409.1-201ENST00000455497 255 ntBASIC6.14□□□□□ -1.43
SHISA3A0PJX4 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 KLF3P2-201ENST00000465138 268 ntBASIC6.14□□□□□ -1.43
SHISA3A0PJX4 AC093627.1-201ENST00000465755 877 ntTSL 3 BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 RPS3AP17-201ENST00000472594 777 ntBASIC6.14□□□□□ -1.43
SHISA3A0PJX4 RPL23AP8-201ENST00000479812 475 ntBASIC6.14□□□□□ -1.43
SHISA3A0PJX4 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 AC111193.1-201ENST00000504097 155 ntBASIC6.14□□□□□ -1.43
SHISA3A0PJX4 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 AC022483.1-201ENST00000514020 567 ntBASIC6.14□□□□□ -1.43
SHISA3A0PJX4 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 AP002812.4-201ENST00000532139 286 ntBASIC6.14□□□□□ -1.43
SHISA3A0PJX4 RPL27A-211ENST00000532359 406 ntTSL 2 BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 AC011611.6-201ENST00000547483 255 ntBASIC6.14□□□□□ -1.43
SHISA3A0PJX4 AL132719.1-201ENST00000554515 423 ntTSL 3 BASIC6.14□□□□□ -1.43
SHISA3A0PJX4 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms