Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 AC111000.6-201ENST00000514471 709 ntBASIC5.72□□□□□ -1.49
SMIM28A0A1B0GU29 OR4A43P-201ENST00000532938 908 ntBASIC5.72□□□□□ -1.49
SMIM28A0A1B0GU29 AC025857.2-201ENST00000602711 238 ntBASIC5.72□□□□□ -1.49
SMIM28A0A1B0GU29 TAS2R6P-201ENST00000605022 826 ntBASIC5.72□□□□□ -1.49
SMIM28A0A1B0GU29 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.72□□□□□ -1.49
SMIM28A0A1B0GU29 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC5.72□□□□□ -1.49
SMIM28A0A1B0GU29 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC5.72□□□□□ -1.49
SMIM28A0A1B0GU29 AC099654.6-201ENST00000636487 512 ntBASIC5.72□□□□□ -1.49
SMIM28A0A1B0GU29 LINC01739-205ENST00000641890 573 ntBASIC5.72□□□□□ -1.49
SMIM28A0A1B0GU29 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SMIM28A0A1B0GU29 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SMIM28A0A1B0GU29 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SMIM28A0A1B0GU29 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.72□□□□□ -1.49
SMIM28A0A1B0GU29 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SMIM28A0A1B0GU29 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
SMIM28A0A1B0GU29 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
SMIM28A0A1B0GU29 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC5.72□□□□□ -1.49
SMIM28A0A1B0GU29 AL355488.2-201ENST00000609909 2850 ntBASIC5.72□□□□□ -1.49
SMIM28A0A1B0GU29 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
SMIM28A0A1B0GU29 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
SMIM28A0A1B0GU29 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.72□□□□□ -1.49
SMIM28A0A1B0GU29 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SMIM28A0A1B0GU29 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.49
SMIM28A0A1B0GU29 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.71□□□□□ -1.49
SMIM28A0A1B0GU29 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SMIM28A0A1B0GU29 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SMIM28A0A1B0GU29 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
SMIM28A0A1B0GU29 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.71□□□□□ -1.5
SMIM28A0A1B0GU29 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.71□□□□□ -1.5
SMIM28A0A1B0GU29 MKI67-201ENST00000368653 11417 ntAPPRIS ALT2 TSL 2 BASIC5.71□□□□□ -1.5
SMIM28A0A1B0GU29 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SMIM28A0A1B0GU29 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC5.71□□□□□ -1.5
SMIM28A0A1B0GU29 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SMIM28A0A1B0GU29 RN7SKP213-201ENST00000410746 298 ntBASIC5.71□□□□□ -1.5
SMIM28A0A1B0GU29 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC5.71□□□□□ -1.5
SMIM28A0A1B0GU29 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
SMIM28A0A1B0GU29 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.71□□□□□ -1.5
SMIM28A0A1B0GU29 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.71□□□□□ -1.5
SMIM28A0A1B0GU29 AC136777.2-201ENST00000522979 358 ntBASIC5.71□□□□□ -1.5
SMIM28A0A1B0GU29 AC134349.2-201ENST00000535136 910 ntBASIC5.71□□□□□ -1.5
SMIM28A0A1B0GU29 AC024940.3-201ENST00000538551 316 ntBASIC5.71□□□□□ -1.5
SMIM28A0A1B0GU29 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.71□□□□□ -1.5
SMIM28A0A1B0GU29 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.71□□□□□ -1.5
SMIM28A0A1B0GU29 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC5.71□□□□□ -1.5
SMIM28A0A1B0GU29 AC006116.3-201ENST00000592968 361 ntBASIC5.71□□□□□ -1.5
SMIM28A0A1B0GU29 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC5.71□□□□□ -1.5
SMIM28A0A1B0GU29 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
SMIM28A0A1B0GU29 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.71□□□□□ -1.5
SMIM28A0A1B0GU29 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.71□□□□□ -1.5
SMIM28A0A1B0GU29 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.71□□□□□ -1.5
SMIM28A0A1B0GU29 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
SMIM28A0A1B0GU29 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.71□□□□□ -1.5
SMIM28A0A1B0GU29 AC092747.4-201ENST00000620519 1861 ntBASIC5.71□□□□□ -1.5
SMIM28A0A1B0GU29 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.7□□□□□ -1.5
SMIM28A0A1B0GU29 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SMIM28A0A1B0GU29 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SMIM28A0A1B0GU29 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.7□□□□□ -1.5
SMIM28A0A1B0GU29 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
SMIM28A0A1B0GU29 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SMIM28A0A1B0GU29 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SMIM28A0A1B0GU29 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SMIM28A0A1B0GU29 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SMIM28A0A1B0GU29 RN7SKP126-201ENST00000411143 300 ntBASIC5.7□□□□□ -1.5
SMIM28A0A1B0GU29 NPM1P36-201ENST00000415681 835 ntBASIC5.7□□□□□ -1.5
SMIM28A0A1B0GU29 AL133482.1-201ENST00000415988 498 ntBASIC5.7□□□□□ -1.5
SMIM28A0A1B0GU29 AL359265.1-201ENST00000440296 795 ntBASIC5.7□□□□□ -1.5
SMIM28A0A1B0GU29 AC068196.1-201ENST00000456895 833 ntTSL 3 BASIC5.7□□□□□ -1.5
SMIM28A0A1B0GU29 AC079168.1-201ENST00000458741 345 ntBASIC5.7□□□□□ -1.5
SMIM28A0A1B0GU29 NDUFA5P12-201ENST00000503796 343 ntBASIC5.7□□□□□ -1.5
SMIM28A0A1B0GU29 AC147055.3-201ENST00000510547 851 ntBASIC5.7□□□□□ -1.5
SMIM28A0A1B0GU29 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC5.7□□□□□ -1.5
SMIM28A0A1B0GU29 BMPR1APS2-201ENST00000527904 1012 ntBASIC5.7□□□□□ -1.5
SMIM28A0A1B0GU29 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC5.7□□□□□ -1.5
SMIM28A0A1B0GU29 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.7□□□□□ -1.5
SMIM28A0A1B0GU29 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC5.7□□□□□ -1.5
SMIM28A0A1B0GU29 AC108738.1-201ENST00000603703 237 ntBASIC5.7□□□□□ -1.5
SMIM28A0A1B0GU29 AL162431.4-201ENST00000604674 411 ntBASIC5.7□□□□□ -1.5
SMIM28A0A1B0GU29 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC5.7□□□□□ -1.5
SMIM28A0A1B0GU29 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SMIM28A0A1B0GU29 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
SMIM28A0A1B0GU29 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.7□□□□□ -1.5
SMIM28A0A1B0GU29 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.7□□□□□ -1.5
SMIM28A0A1B0GU29 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
SMIM28A0A1B0GU29 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
SMIM28A0A1B0GU29 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
SMIM28A0A1B0GU29 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
SMIM28A0A1B0GU29 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.69□□□□□ -1.5
SMIM28A0A1B0GU29 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC5.69□□□□□ -1.5
SMIM28A0A1B0GU29 PANDAR-201ENST00000629595 1506 ntBASIC5.69□□□□□ -1.5
SMIM28A0A1B0GU29 GTDC1-220ENST00000618778 2317 ntTSL 5 BASIC5.69□□□□□ -1.5
SMIM28A0A1B0GU29 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SMIM28A0A1B0GU29 U3.3-201ENST00000362986 216 ntBASIC5.69□□□□□ -1.5
SMIM28A0A1B0GU29 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SMIM28A0A1B0GU29 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
SMIM28A0A1B0GU29 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
SMIM28A0A1B0GU29 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.69□□□□□ -1.5
SMIM28A0A1B0GU29 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.69□□□□□ -1.5
SMIM28A0A1B0GU29 AC138761.5-201ENST00000433967 325 ntBASIC5.69□□□□□ -1.5
SMIM28A0A1B0GU29 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SMIM28A0A1B0GU29 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms