Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHB1Q9Y5F3 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
PCDHB1Q9Y5F3 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHB1Q9Y5F3 RFTN2-201ENST00000295049 5827 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHB1Q9Y5F3 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.17□□□□□ -1.42
PCDHB1Q9Y5F3 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
PCDHB1Q9Y5F3 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHB1Q9Y5F3 AC068775.1-202ENST00000538173 1602 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
PCDHB1Q9Y5F3 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
PCDHB1Q9Y5F3 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
PCDHB1Q9Y5F3 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.17□□□□□ -1.42
PCDHB1Q9Y5F3 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHB1Q9Y5F3 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
PCDHB1Q9Y5F3 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 AC116158.1-201ENST00000560231 2129 ntBASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 RNU1-49P-201ENST00000363468 159 ntBASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 RNA5SP346-201ENST00000363541 121 ntBASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 AC092634.2-201ENST00000428146 1010 ntBASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 NDUFA5P10-201ENST00000432147 357 ntBASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 USP9YP24-201ENST00000434374 697 ntBASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 ATP5LP2-201ENST00000440646 311 ntBASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 USP9YP17-201ENST00000444617 696 ntBASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 AC069540.1-201ENST00000446320 988 ntBASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 AC099063.2-201ENST00000446360 662 ntBASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 AC098847.1-201ENST00000473094 348 ntBASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 MTND6P8-201ENST00000503471 522 ntBASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 AC026414.1-201ENST00000504046 698 ntBASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 GOLGA5P1-201ENST00000507317 980 ntBASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 AC095052.1-201ENST00000509955 863 ntBASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 AC008126.1-201ENST00000549019 480 ntBASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 AL049830.4-201ENST00000555149 351 ntBASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 MTND3P12-201ENST00000559068 328 ntBASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 AC022079.2-201ENST00000619739 566 ntBASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 EIF3EP1-201ENST00000433978 1316 ntBASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 AC092451.3-201ENST00000625067 1343 ntBASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 AC245100.2-201ENST00000454544 1679 ntBASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 AC024651.2-201ENST00000562480 2098 ntBASIC6.16□□□□□ -1.42
PCDHB1Q9Y5F3 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
PCDHB1Q9Y5F3 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
PCDHB1Q9Y5F3 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.42
PCDHB1Q9Y5F3 AC079753.1-201ENST00000623243 3868 ntBASIC6.15□□□□□ -1.42
PCDHB1Q9Y5F3 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.15□□□□□ -1.42
PCDHB1Q9Y5F3 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
PCDHB1Q9Y5F3 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PCDHB1Q9Y5F3 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
PCDHB1Q9Y5F3 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
PCDHB1Q9Y5F3 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
PCDHB1Q9Y5F3 RNA5SP110-201ENST00000362638 115 ntBASIC6.15□□□□□ -1.42
PCDHB1Q9Y5F3 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.42
PCDHB1Q9Y5F3 RNU6-1005P-201ENST00000384519 107 ntBASIC6.15□□□□□ -1.42
PCDHB1Q9Y5F3 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
PCDHB1Q9Y5F3 AL034403.1-201ENST00000399414 885 ntBASIC6.15□□□□□ -1.42
PCDHB1Q9Y5F3 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
PCDHB1Q9Y5F3 RN7SKP151-201ENST00000410230 316 ntBASIC6.15□□□□□ -1.42
PCDHB1Q9Y5F3 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.15□□□□□ -1.42
PCDHB1Q9Y5F3 VPS26BP1-201ENST00000417155 755 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms