Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 AC097460.3-201ENST00000623099 442 ntBASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 LINC00216-201ENST00000623548 1126 ntBASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 DDX6P1-205ENST00000441966 1436 ntBASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CTDP1Q9Y5B0 IARS-213ENST00000627121 4587 ntTSL 5 BASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 AOX3P-204ENST00000491025 2107 ntBASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 OR2AT2P-201ENST00000413438 905 ntBASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 SDHDP6-201ENST00000414693 480 ntBASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 MTND1P33-201ENST00000446251 917 ntBASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 OR52Y1P-201ENST00000452418 828 ntBASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 AC104164.1-201ENST00000460282 590 ntBASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 RN7SL717P-201ENST00000478343 297 ntBASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 AC124945.1-201ENST00000485133 188 ntBASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 PRELID3BP6-201ENST00000503839 571 ntBASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 AC119751.5-201ENST00000514077 770 ntBASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 RN7SKP265-201ENST00000516448 223 ntBASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 OR7E10P-201ENST00000526420 991 ntBASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 AC006530.1-201ENST00000555980 571 ntBASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 AC090888.2-201ENST00000559765 1144 ntBASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 OR4H6P-201ENST00000563771 921 ntBASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 AGGF1P5-201ENST00000567900 919 ntBASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 AC023762.1-201ENST00000603280 584 ntBASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 RN7SL787P-201ENST00000613000 284 ntBASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.91□□□□□ -1.3
CTDP1Q9Y5B0 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 MIR375-201ENST00000362103 64 ntBASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 SNORD8-201ENST00000363915 110 ntBASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 AL451046.1-201ENST00000406097 534 ntBASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 ELOCP3-201ENST00000439303 348 ntBASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 AC064862.4-201ENST00000442180 334 ntBASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 AL139120.1-201ENST00000443652 358 ntTSL 3 BASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 Z77249.1-201ENST00000444622 1175 ntBASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 RPS27AP3-201ENST00000453803 454 ntBASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 AC069277.2-201ENST00000454211 432 ntBASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 RPL23AP40-201ENST00000487630 390 ntBASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 ASNSP4-201ENST00000511103 447 ntBASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 RPL7L1P4-201ENST00000513004 707 ntBASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 RNU6-1102P-201ENST00000516149 96 ntBASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 CYCSP22-201ENST00000517555 339 ntBASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC6.9□□□□□ -1.3
CTDP1Q9Y5B0 EEF1A1P37-201ENST00000522748 715 ntBASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms