Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
SSX2IPQ9Y2D8 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 CASC19-261ENST00000641853 1638 ntBASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 SHQ1P1-201ENST00000437111 1544 ntBASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 PPCS-201ENST00000372556 984 ntTSL 2 BASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 STAT4-203ENST00000409995 709 ntTSL 5 BASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 AC073257.2-201ENST00000413991 528 ntTSL 3 BASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 MGAT2P2-201ENST00000427194 797 ntBASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 AL445928.1-201ENST00000435545 222 ntBASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 GAPDHP48-201ENST00000436626 961 ntBASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 KRTAP8-2P-201ENST00000440620 186 ntBASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 AL606517.1-201ENST00000446914 387 ntBASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 snoU13.29-201ENST00000459370 104 ntBASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 AC073594.1-201ENST00000462065 364 ntBASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 SLC25A51P1-201ENST00000468432 871 ntBASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 AC008629.2-201ENST00000503783 483 ntBASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 HMGN2P36-201ENST00000529541 409 ntBASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 IGBP1P1-201ENST00000554337 1009 ntBASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 CKS1BP1-201ENST00000555221 240 ntBASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 AC119403.2-201ENST00000590960 598 ntBASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 AC020916.2-201ENST00000591242 360 ntBASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 AC107993.1-201ENST00000591343 684 ntBASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 AL589674.2-201ENST00000604304 337 ntBASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 AC024589.2-201ENST00000605642 1294 ntBASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 CR589904.2-201ENST00000612533 440 ntBASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 AL163051.2-201ENST00000618976 735 ntBASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 AC008993.2-201ENST00000631744 806 ntBASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 AL445984.1-201ENST00000637834 659 ntBASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 AC096921.2-201ENST00000561507 1916 ntBASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 AC068870.3-201ENST00000625077 2536 ntBASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 AC092070.2-203ENST00000598377 3644 ntBASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 AC110792.3-201ENST00000595906 1614 ntBASIC6.36□□□□□ -1.39
SSX2IPQ9Y2D8 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.35□□□□□ -1.39
SSX2IPQ9Y2D8 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SSX2IPQ9Y2D8 AL355834.1-201ENST00000556602 3965 ntBASIC6.35□□□□□ -1.39
SSX2IPQ9Y2D8 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
SSX2IPQ9Y2D8 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
SSX2IPQ9Y2D8 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
SSX2IPQ9Y2D8 SNORD51.1-201ENST00000365405 77 ntBASIC6.35□□□□□ -1.39
SSX2IPQ9Y2D8 GNG5P2-201ENST00000372054 207 ntBASIC6.35□□□□□ -1.39
SSX2IPQ9Y2D8 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.35□□□□□ -1.39
SSX2IPQ9Y2D8 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC6.35□□□□□ -1.39
SSX2IPQ9Y2D8 OR3A2-201ENST00000408891 1076 ntBASIC6.35□□□□□ -1.39
SSX2IPQ9Y2D8 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.35□□□□□ -1.39
SSX2IPQ9Y2D8 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC6.35□□□□□ -1.39
SSX2IPQ9Y2D8 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC6.35□□□□□ -1.39
SSX2IPQ9Y2D8 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
SSX2IPQ9Y2D8 MRPS21P2-201ENST00000424704 264 ntBASIC6.35□□□□□ -1.39
SSX2IPQ9Y2D8 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.35□□□□□ -1.39
SSX2IPQ9Y2D8 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
SSX2IPQ9Y2D8 AC002504.1-201ENST00000438281 691 ntBASIC6.35□□□□□ -1.39
SSX2IPQ9Y2D8 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC6.35□□□□□ -1.39
SSX2IPQ9Y2D8 AL022237.1-201ENST00000446663 358 ntBASIC6.35□□□□□ -1.39
SSX2IPQ9Y2D8 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.35□□□□□ -1.39
SSX2IPQ9Y2D8 MYO5BP2-201ENST00000449815 1277 ntBASIC6.35□□□□□ -1.39
SSX2IPQ9Y2D8 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC6.35□□□□□ -1.39
SSX2IPQ9Y2D8 AC098826.2-201ENST00000452011 651 ntBASIC6.35□□□□□ -1.39
SSX2IPQ9Y2D8 RNU7-157P-201ENST00000459600 66 ntBASIC6.35□□□□□ -1.39
SSX2IPQ9Y2D8 RPL23AP40-201ENST00000487630 390 ntBASIC6.35□□□□□ -1.39
SSX2IPQ9Y2D8 RPS26P24-201ENST00000497656 331 ntBASIC6.35□□□□□ -1.39
SSX2IPQ9Y2D8 LINC02492-201ENST00000502952 564 ntTSL 5 BASIC6.35□□□□□ -1.39
SSX2IPQ9Y2D8 AC010468.3-201ENST00000508225 458 ntBASIC6.35□□□□□ -1.39
SSX2IPQ9Y2D8 AC109481.1-201ENST00000509173 282 ntBASIC6.35□□□□□ -1.39
SSX2IPQ9Y2D8 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC6.35□□□□□ -1.39
SSX2IPQ9Y2D8 LINC00535-202ENST00000517785 264 ntTSL 3 BASIC6.35□□□□□ -1.39
SSX2IPQ9Y2D8 NPM1P52-201ENST00000518264 846 ntBASIC6.35□□□□□ -1.39
SSX2IPQ9Y2D8 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.35□□□□□ -1.39
SSX2IPQ9Y2D8 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC6.35□□□□□ -1.39
SSX2IPQ9Y2D8 AP001267.4-201ENST00000602598 545 ntBASIC6.35□□□□□ -1.39
SSX2IPQ9Y2D8 AL158050.2-201ENST00000605336 568 ntBASIC6.35□□□□□ -1.39
SSX2IPQ9Y2D8 AL450270.1-201ENST00000606160 391 ntBASIC6.35□□□□□ -1.39
SSX2IPQ9Y2D8 AL021368.3-201ENST00000607119 578 ntBASIC6.35□□□□□ -1.39
SSX2IPQ9Y2D8 AL355802.4-201ENST00000607635 548 ntBASIC6.35□□□□□ -1.39
SSX2IPQ9Y2D8 AC005156.1-201ENST00000613371 573 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 115.6 ms