Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 CLUHP1-201ENST00000435012 1190 ntBASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 BRWD1-IT1-201ENST00000435608 489 ntTSL 3 BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 TMX2P1-201ENST00000436507 708 ntBASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 HMGB1P31-201ENST00000437242 427 ntBASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 AL139161.1-201ENST00000443207 190 ntTSL 5 BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 AC112653.1-201ENST00000443851 386 ntBASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 ZNF331-203ENST00000449416 3817 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 UBDP1-202ENST00000457888 382 ntBASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 AP005202.1-201ENST00000489915 867 ntBASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 RNA5SP441-201ENST00000516809 88 ntBASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 AC104383.1-201ENST00000530297 370 ntBASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 AC005730.3-201ENST00000583067 366 ntBASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 AC011374.2-201ENST00000607135 526 ntBASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 AC016405.2-201ENST00000607393 312 ntBASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 AC012360.2-201ENST00000609349 391 ntBASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 LINC01739-205ENST00000641890 573 ntBASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 PSG6-201ENST00000187910 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
ZC3H4Q9UPT8 TMEM108-201ENST00000321871 3744 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 GABRB3-225ENST00000638099 2752 ntTSL 5 BASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 BBX-207ENST00000416476 2178 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 EGFEM1P-205ENST00000483846 2327 ntTSL 5 BASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 OR10W1-201ENST00000395079 1469 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 AC132825.1-201ENST00000463573 2247 ntBASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 BRD8-204ENST00000411594 2967 ntTSL 5 BASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 P3H2-203ENST00000427335 2963 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 CDY19P-201ENST00000411668 1613 ntBASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 MTND5P17-201ENST00000418405 1603 ntBASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 CDY18P-201ENST00000438294 1609 ntBASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 RIPOR2-208ENST00000613507 5539 ntAPPRIS P4 TSL 5 BASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 NAMPTP1-201ENST00000440465 2514 ntBASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 USP3-201ENST00000268049 5311 ntTSL 5 BASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 AP005901.5-201ENST00000545779 1796 ntBASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 NLGN4X-201ENST00000275857 5454 ntAPPRIS P2 TSL 1 (best) BASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 FAM114A1-201ENST00000358869 4050 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 MIR142-201ENST00000384835 87 ntBASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 MIR188-201ENST00000385034 86 ntBASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 TRAV5-201ENST00000390427 352 ntAPPRIS P1 BASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 UBBP1-201ENST00000392399 473 ntBASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 AC007068.1-201ENST00000396690 844 ntBASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 SMARCE1P6-201ENST00000398372 1216 ntBASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 TPT1P2-201ENST00000413105 503 ntBASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 OFD1P2Y-201ENST00000421895 1149 ntBASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 AC008072.1-201ENST00000434254 824 ntBASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 AC092106.2-201ENST00000436597 487 ntBASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 AC092170.1-201ENST00000440211 356 ntBASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 OR13C1P-201ENST00000457612 963 ntBASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 AL121769.1-201ENST00000469473 401 ntBASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 AGK-205ENST00000492693 1046 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 AC079382.1-201ENST00000493346 557 ntBASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 AC109445.1-201ENST00000512356 383 ntBASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 AC025465.4-201ENST00000513422 638 ntBASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 TCP11X3P-202ENST00000514289 1254 ntBASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 AC007068.2-201ENST00000543168 395 ntBASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 AL121839.1-201ENST00000556233 1185 ntBASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 AC103881.1-201ENST00000603476 538 ntBASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 AC009220.3-201ENST00000604318 586 ntBASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 AC023513.1-201ENST00000604396 691 ntBASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 AL390037.1-201ENST00000610918 431 ntTSL 3 BASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 AL136981.2-201ENST00000617319 734 ntBASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 SNX18P10-201ENST00000625014 519 ntBASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 MMACHC-201ENST00000401061 5296 ntAPPRIS P1 TSL 2 BASIC8.44□□□□□ -1.06
ZC3H4Q9UPT8 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms