Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 OR6E1P-201ENST00000414424 923 ntBASIC6.62□□□□□ -1.35
CTNNA3Q9UI47 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC6.62□□□□□ -1.35
CTNNA3Q9UI47 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.62□□□□□ -1.35
CTNNA3Q9UI47 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC6.62□□□□□ -1.35
CTNNA3Q9UI47 OR6D1P-201ENST00000436165 939 ntBASIC6.62□□□□□ -1.35
CTNNA3Q9UI47 MED28P3-201ENST00000444288 531 ntBASIC6.62□□□□□ -1.35
CTNNA3Q9UI47 AC083899.1-201ENST00000454465 3819 ntBASIC6.62□□□□□ -1.35
CTNNA3Q9UI47 AZGP1P2-201ENST00000454506 345 ntBASIC6.62□□□□□ -1.35
CTNNA3Q9UI47 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.62□□□□□ -1.35
CTNNA3Q9UI47 SMARCE1P3-201ENST00000553649 1231 ntBASIC6.62□□□□□ -1.35
CTNNA3Q9UI47 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.62□□□□□ -1.35
CTNNA3Q9UI47 AC016839.1-201ENST00000578162 867 ntBASIC6.62□□□□□ -1.35
CTNNA3Q9UI47 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.62□□□□□ -1.35
CTNNA3Q9UI47 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.62□□□□□ -1.35
CTNNA3Q9UI47 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC6.62□□□□□ -1.35
CTNNA3Q9UI47 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CTNNA3Q9UI47 MIR6719-201ENST00000622428 87 ntBASIC6.62□□□□□ -1.35
CTNNA3Q9UI47 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
CTNNA3Q9UI47 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
CTNNA3Q9UI47 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC6.62□□□□□ -1.35
CTNNA3Q9UI47 AC125336.1-201ENST00000508893 2827 ntBASIC6.62□□□□□ -1.35
CTNNA3Q9UI47 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CTNNA3Q9UI47 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.61□□□□□ -1.35
CTNNA3Q9UI47 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CTNNA3Q9UI47 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.61□□□□□ -1.35
CTNNA3Q9UI47 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC6.61□□□□□ -1.35
CTNNA3Q9UI47 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CTNNA3Q9UI47 Z83820.1-201ENST00000456978 1499 ntBASIC6.61□□□□□ -1.35
CTNNA3Q9UI47 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
CTNNA3Q9UI47 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
CTNNA3Q9UI47 AC144833.1-201ENST00000567953 4089 ntBASIC6.61□□□□□ -1.35
CTNNA3Q9UI47 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CTNNA3Q9UI47 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC6.61□□□□□ -1.35
CTNNA3Q9UI47 RN7SKP185-201ENST00000362813 326 ntBASIC6.61□□□□□ -1.35
CTNNA3Q9UI47 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC6.61□□□□□ -1.35
CTNNA3Q9UI47 RANP7-201ENST00000418085 644 ntBASIC6.61□□□□□ -1.35
CTNNA3Q9UI47 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC6.61□□□□□ -1.35
CTNNA3Q9UI47 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.61□□□□□ -1.35
CTNNA3Q9UI47 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC6.61□□□□□ -1.35
CTNNA3Q9UI47 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC6.61□□□□□ -1.35
CTNNA3Q9UI47 AP000281.1-201ENST00000444036 316 ntBASIC6.61□□□□□ -1.35
CTNNA3Q9UI47 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.61□□□□□ -1.35
CTNNA3Q9UI47 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC6.61□□□□□ -1.35
CTNNA3Q9UI47 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CTNNA3Q9UI47 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC6.61□□□□□ -1.35
CTNNA3Q9UI47 NPM1P21-201ENST00000513394 762 ntBASIC6.61□□□□□ -1.35
CTNNA3Q9UI47 RNA5SP362-201ENST00000516048 118 ntBASIC6.61□□□□□ -1.35
CTNNA3Q9UI47 OR4A17P-201ENST00000526032 904 ntBASIC6.61□□□□□ -1.35
CTNNA3Q9UI47 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.61□□□□□ -1.35
CTNNA3Q9UI47 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC6.61□□□□□ -1.35
CTNNA3Q9UI47 SPINK14-202ENST00000562793 157 ntTSL 5 BASIC6.61□□□□□ -1.35
CTNNA3Q9UI47 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC6.61□□□□□ -1.35
CTNNA3Q9UI47 FO393422.1-201ENST00000603908 708 ntBASIC6.61□□□□□ -1.35
CTNNA3Q9UI47 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.61□□□□□ -1.35
CTNNA3Q9UI47 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CTNNA3Q9UI47 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CTNNA3Q9UI47 ALB-202ENST00000401494 1659 ntTSL 5 BASIC6.61□□□□□ -1.35
CTNNA3Q9UI47 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
CTNNA3Q9UI47 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
CTNNA3Q9UI47 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.61□□□□□ -1.35
CTNNA3Q9UI47 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC6.61□□□□□ -1.35
CTNNA3Q9UI47 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CTNNA3Q9UI47 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CTNNA3Q9UI47 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
CTNNA3Q9UI47 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CTNNA3Q9UI47 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
CTNNA3Q9UI47 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC6.6□□□□□ -1.35
CTNNA3Q9UI47 OR9K1P-201ENST00000326513 941 ntBASIC6.6□□□□□ -1.35
CTNNA3Q9UI47 RN7SKP28-201ENST00000364770 305 ntBASIC6.6□□□□□ -1.35
CTNNA3Q9UI47 RNA5SP187-201ENST00000384400 119 ntBASIC6.6□□□□□ -1.35
CTNNA3Q9UI47 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC6.6□□□□□ -1.35
CTNNA3Q9UI47 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.6□□□□□ -1.35
CTNNA3Q9UI47 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.6□□□□□ -1.35
CTNNA3Q9UI47 AL355433.1-201ENST00000422804 300 ntBASIC6.6□□□□□ -1.35
CTNNA3Q9UI47 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CTNNA3Q9UI47 HMGN2P27-201ENST00000427352 270 ntBASIC6.6□□□□□ -1.35
CTNNA3Q9UI47 AC138761.5-201ENST00000433967 325 ntBASIC6.6□□□□□ -1.35
CTNNA3Q9UI47 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.6□□□□□ -1.35
CTNNA3Q9UI47 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.6□□□□□ -1.35
CTNNA3Q9UI47 RN7SL583P-201ENST00000475692 287 ntBASIC6.6□□□□□ -1.35
CTNNA3Q9UI47 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.6□□□□□ -1.35
CTNNA3Q9UI47 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC6.6□□□□□ -1.35
CTNNA3Q9UI47 AC027216.1-201ENST00000577726 685 ntBASIC6.6□□□□□ -1.35
CTNNA3Q9UI47 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC6.6□□□□□ -1.35
CTNNA3Q9UI47 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.6□□□□□ -1.35
CTNNA3Q9UI47 AC012616.1-201ENST00000600294 197 ntBASIC6.6□□□□□ -1.35
CTNNA3Q9UI47 AL139124.1-201ENST00000609123 421 ntBASIC6.6□□□□□ -1.35
CTNNA3Q9UI47 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC6.6□□□□□ -1.35
CTNNA3Q9UI47 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.6□□□□□ -1.35
CTNNA3Q9UI47 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CTNNA3Q9UI47 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
CTNNA3Q9UI47 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
CTNNA3Q9UI47 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC6.6□□□□□ -1.35
CTNNA3Q9UI47 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
CTNNA3Q9UI47 ADH6-202ENST00000394897 3337 ntTSL 2 BASIC6.6□□□□□ -1.35
CTNNA3Q9UI47 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.59□□□□□ -1.35
CTNNA3Q9UI47 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
CTNNA3Q9UI47 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CTNNA3Q9UI47 AC073429.2-201ENST00000569694 1444 ntBASIC6.59□□□□□ -1.35
CTNNA3Q9UI47 AC116158.1-201ENST00000560231 2129 ntBASIC6.59□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms