Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC100784.1-201ENST00000522790 310 ntBASIC5.09□□□□□ -1.59
VAPAQ9P0L0 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.09□□□□□ -1.59
VAPAQ9P0L0 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC5.09□□□□□ -1.59
VAPAQ9P0L0 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.09□□□□□ -1.59
VAPAQ9P0L0 AC006272.2-201ENST00000594725 163 ntBASIC5.09□□□□□ -1.59
VAPAQ9P0L0 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.09□□□□□ -1.59
VAPAQ9P0L0 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.09□□□□□ -1.59
VAPAQ9P0L0 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.09□□□□□ -1.59
VAPAQ9P0L0 FO681491.1-202ENST00000623392 737 ntBASIC5.09□□□□□ -1.59
VAPAQ9P0L0 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
VAPAQ9P0L0 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.09□□□□□ -1.59
VAPAQ9P0L0 LINC01963-201ENST00000562038 3148 ntBASIC5.09□□□□□ -1.59
VAPAQ9P0L0 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
VAPAQ9P0L0 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.6
VAPAQ9P0L0 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.6
VAPAQ9P0L0 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
VAPAQ9P0L0 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.08□□□□□ -1.6
VAPAQ9P0L0 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
VAPAQ9P0L0 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
VAPAQ9P0L0 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
VAPAQ9P0L0 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VAPAQ9P0L0 AC022417.1-201ENST00000624768 1303 ntBASIC5.08□□□□□ -1.6
VAPAQ9P0L0 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
VAPAQ9P0L0 RNU1-19P-201ENST00000363306 165 ntBASIC5.08□□□□□ -1.6
VAPAQ9P0L0 SNORA16A-201ENST00000384342 137 ntBASIC5.08□□□□□ -1.6
VAPAQ9P0L0 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.08□□□□□ -1.6
VAPAQ9P0L0 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.08□□□□□ -1.6
VAPAQ9P0L0 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.08□□□□□ -1.6
VAPAQ9P0L0 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.08□□□□□ -1.6
VAPAQ9P0L0 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.08□□□□□ -1.6
VAPAQ9P0L0 TCEA1P3-201ENST00000443005 880 ntBASIC5.08□□□□□ -1.6
VAPAQ9P0L0 SPRR2F-201ENST00000468739 681 ntAPPRIS P1 TSL 3 BASIC5.08□□□□□ -1.6
VAPAQ9P0L0 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
VAPAQ9P0L0 AL117692.1-201ENST00000494283 713 ntBASIC5.08□□□□□ -1.6
VAPAQ9P0L0 AC092349.1-201ENST00000504903 310 ntBASIC5.08□□□□□ -1.6
VAPAQ9P0L0 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.08□□□□□ -1.6
VAPAQ9P0L0 AC122718.2-201ENST00000505325 591 ntBASIC5.08□□□□□ -1.6
VAPAQ9P0L0 AC145141.1-201ENST00000510180 567 ntTSL 4 BASIC5.08□□□□□ -1.6
VAPAQ9P0L0 MTND6P2-201ENST00000512226 524 ntBASIC5.08□□□□□ -1.6
VAPAQ9P0L0 SNORA43.3-201ENST00000517240 103 ntBASIC5.08□□□□□ -1.6
VAPAQ9P0L0 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.08□□□□□ -1.6
VAPAQ9P0L0 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.08□□□□□ -1.6
VAPAQ9P0L0 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VAPAQ9P0L0 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.08□□□□□ -1.6
VAPAQ9P0L0 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC5.08□□□□□ -1.6
VAPAQ9P0L0 RN7SL356P-201ENST00000582228 248 ntBASIC5.08□□□□□ -1.6
VAPAQ9P0L0 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.08□□□□□ -1.6
VAPAQ9P0L0 AC012616.1-201ENST00000600294 197 ntBASIC5.08□□□□□ -1.6
VAPAQ9P0L0 FAM72A-208ENST00000607379 1139 ntBASIC5.08□□□□□ -1.6
VAPAQ9P0L0 AC109583.2-201ENST00000617367 129 ntBASIC5.08□□□□□ -1.6
VAPAQ9P0L0 AP005431.1-201ENST00000618479 319 ntBASIC5.08□□□□□ -1.6
VAPAQ9P0L0 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.08□□□□□ -1.6
VAPAQ9P0L0 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.08□□□□□ -1.6
VAPAQ9P0L0 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
VAPAQ9P0L0 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.08□□□□□ -1.6
VAPAQ9P0L0 SMG1P7-201ENST00000565246 2704 ntBASIC5.08□□□□□ -1.6
VAPAQ9P0L0 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.08□□□□□ -1.6
VAPAQ9P0L0 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.08□□□□□ -1.6
VAPAQ9P0L0 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VAPAQ9P0L0 IFIT1P1-201ENST00000400497 1449 ntBASIC5.07□□□□□ -1.6
VAPAQ9P0L0 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
VAPAQ9P0L0 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VAPAQ9P0L0 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VAPAQ9P0L0 HEMGN-202ENST00000616898 2305 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VAPAQ9P0L0 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
VAPAQ9P0L0 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
VAPAQ9P0L0 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.07□□□□□ -1.6
VAPAQ9P0L0 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VAPAQ9P0L0 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VAPAQ9P0L0 PCAT14-202ENST00000627127 3935 ntBASIC5.07□□□□□ -1.6
VAPAQ9P0L0 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
VAPAQ9P0L0 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.07□□□□□ -1.6
VAPAQ9P0L0 GAPDHP42-201ENST00000406848 981 ntBASIC5.07□□□□□ -1.6
VAPAQ9P0L0 RPS3AP2-201ENST00000407190 754 ntBASIC5.07□□□□□ -1.6
VAPAQ9P0L0 CBX1P3-201ENST00000413296 527 ntBASIC5.07□□□□□ -1.6
VAPAQ9P0L0 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.07□□□□□ -1.6
VAPAQ9P0L0 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VAPAQ9P0L0 AL133173.1-201ENST00000423458 397 ntBASIC5.07□□□□□ -1.6
VAPAQ9P0L0 RPL12P17-201ENST00000432393 498 ntBASIC5.07□□□□□ -1.6
VAPAQ9P0L0 HLA-DPA3-207ENST00000454398 229 ntBASIC5.07□□□□□ -1.6
VAPAQ9P0L0 RPL12P24-201ENST00000474907 486 ntBASIC5.07□□□□□ -1.6
VAPAQ9P0L0 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.07□□□□□ -1.6
VAPAQ9P0L0 Vault.2-201ENST00000516519 98 ntBASIC5.07□□□□□ -1.6
VAPAQ9P0L0 AC011853.1-201ENST00000518911 454 ntBASIC5.07□□□□□ -1.6
VAPAQ9P0L0 TRIM77BP-201ENST00000524985 1119 ntBASIC5.07□□□□□ -1.6
VAPAQ9P0L0 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.07□□□□□ -1.6
VAPAQ9P0L0 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC5.07□□□□□ -1.6
VAPAQ9P0L0 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
VAPAQ9P0L0 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.07□□□□□ -1.6
VAPAQ9P0L0 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.07□□□□□ -1.6
VAPAQ9P0L0 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VAPAQ9P0L0 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.07□□□□□ -1.6
VAPAQ9P0L0 AC114947.2-201ENST00000565748 2125 ntBASIC5.07□□□□□ -1.6
VAPAQ9P0L0 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.07□□□□□ -1.6
VAPAQ9P0L0 AC022884.2-201ENST00000578535 580 ntBASIC5.07□□□□□ -1.6
VAPAQ9P0L0 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.07□□□□□ -1.6
VAPAQ9P0L0 AC009027.1-201ENST00000604510 479 ntBASIC5.07□□□□□ -1.6
VAPAQ9P0L0 AC073592.6-201ENST00000624271 415 ntBASIC5.07□□□□□ -1.6
VAPAQ9P0L0 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
VAPAQ9P0L0 YES1P1-201ENST00000418510 1628 ntBASIC5.07□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms