Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC034268.2-201ENST00000571784 482 ntBASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 CDRT8-201ENST00000579752 467 ntTSL 3 BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 AC016629.2-201ENST00000597341 199 ntBASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 FAM205C-203ENST00000603640 1017 ntAPPRIS P4 TSL 5 BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 AL139286.1-201ENST00000604465 483 ntBASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 AC007363.1-201ENST00000604736 620 ntBASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 MEMO1P5-201ENST00000604810 406 ntBASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 AL109936.2-201ENST00000605350 650 ntBASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 AC103710.1-201ENST00000610003 901 ntBASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 KIF1B-201ENST00000263934 6816 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 EEF1A1P9-201ENST00000514975 1383 ntBASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 ZADH2-202ENST00000537114 3205 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 HDAC9-218ENST00000456174 2307 ntTSL 2 BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 FAM47E-202ENST00000502320 6249 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 SLC25A24-202ENST00000370041 3404 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 HIST1H4E-201ENST00000615164 1487 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 KIAA0232-202ENST00000425103 7771 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 MAP4K4-203ENST00000347699 3792 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 SLC2A3-201ENST00000075120 3915 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 RBM43-201ENST00000331426 4192 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 MS4A6A-208ENST00000528851 1806 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CUEDC1Q9NWM3 ATF2-203ENST00000392544 1919 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 EZH1-201ENST00000415827 4608 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 SCN9A-201ENST00000303354 9786 ntAPPRIS ALT1 TSL 5 BASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 AL512662.1-201ENST00000624850 2251 ntBASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 SLC24A1-209ENST00000537259 3983 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 NSRP1-217ENST00000612959 2420 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 FKBP15-201ENST00000238256 4336 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 PRLR-202ENST00000310101 1297 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 ANKS1B-201ENST00000329257 996 ntTSL 5 BASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 Y_RNA.419-201ENST00000384041 102 ntBASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 MT-TR-201ENST00000387439 65 ntBASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 IGLV5-52-201ENST00000390289 379 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 RNA5SP18-201ENST00000390935 121 ntBASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 RNU6-780P-201ENST00000391030 104 ntBASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 RSU1P3-201ENST00000412878 835 ntBASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 AC093107.1-201ENST00000422772 609 ntBASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 AC006017.1-201ENST00000424630 673 ntTSL 3 BASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 AC092167.1-201ENST00000435466 495 ntTSL 4 BASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 LINC01805-201ENST00000436433 572 ntTSL 5 BASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 AL590682.1-201ENST00000437248 344 ntBASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 AL353803.3-201ENST00000444641 335 ntBASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 AL161722.1-201ENST00000446972 1032 ntBASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 AC079776.3-201ENST00000450665 370 ntBASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 SNRPGP6-201ENST00000451124 220 ntBASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 AC022364.2-201ENST00000457963 554 ntBASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 RN7SL19P-201ENST00000462522 306 ntBASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 RN7SL414P-201ENST00000469545 294 ntBASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 RN7SL259P-201ENST00000478499 253 ntBASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 FTH1P23-201ENST00000492727 550 ntBASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 AC110792.2-201ENST00000510278 224 ntBASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 RNU6-794P-201ENST00000517261 64 ntBASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 IGLV10-67-201ENST00000519446 325 ntBASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 AC084361.1-201ENST00000537730 607 ntTSL 3 BASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 PDCD5P1-201ENST00000543528 309 ntBASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 AL359212.1-201ENST00000556608 614 ntBASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 AC044913.1-201ENST00000557200 430 ntBASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 RN7SL786P-201ENST00000579130 298 ntBASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 RN7SL237P-201ENST00000580912 287 ntBASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 MIR4642-201ENST00000583943 82 ntBASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 AC010980.1-204ENST00000589724 585 ntTSL 5 BASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 AC093074.1-201ENST00000590280 556 ntTSL 4 BASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 AC025278.1-201ENST00000593558 515 ntTSL 2 BASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 AL161729.4-201ENST00000604650 476 ntBASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 IGKV1OR1-1-201ENST00000613775 347 ntBASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 YWHAEP7-203ENST00000622054 312 ntBASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 AC119674.1-212ENST00000641155 993 ntBASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 CCR9-204ENST00000422395 1331 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 ZMYM6-203ENST00000373333 1473 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 MTFR2-205ENST00000451457 1524 ntAPPRIS P2 TSL 1 (best) BASIC7.4□□□□□ -1.22
CUEDC1Q9NWM3 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.23
CUEDC1Q9NWM3 ACAA2-206ENST00000589432 1840 ntTSL 5 BASIC7.4□□□□□ -1.23
CUEDC1Q9NWM3 AL022068.1-201ENST00000636202 1875 ntTSL 5 BASIC7.4□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms