Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CCM2LQ9NUG4 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 CYP4A22-206ENST00000619754 2351 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 AOX3P-204ENST00000491025 2107 ntBASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 SNORA64.3-201ENST00000365647 134 ntBASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 RNU6-729P-201ENST00000384399 107 ntBASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 FCF1P5-201ENST00000406490 482 ntBASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 RN7SKP278-201ENST00000410504 342 ntBASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 RPLP1P10-201ENST00000413972 339 ntBASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 SPATA20P1-201ENST00000423089 438 ntBASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 CACYBPP1-201ENST00000438592 684 ntBASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 AC002542.1-201ENST00000440683 193 ntBASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 AC079922.1-201ENST00000443291 359 ntBASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 MTND2P22-201ENST00000444325 1033 ntBASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 MTCYBP42-201ENST00000444653 1130 ntBASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 RNF148-202ENST00000447240 839 ntTSL 2 BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 AC005410.1-202ENST00000460347 485 ntBASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 AC078785.2-201ENST00000462010 1253 ntTSL 3 BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 UOX-201ENST00000471089 899 ntBASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 PPP1R2P6-201ENST00000478565 588 ntBASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 AC011037.1-201ENST00000483964 558 ntBASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 AC118465.1-201ENST00000513820 1271 ntBASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 ACER3-213ENST00000533873 929 ntTSL 2 BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 PSMA3-AS1-206ENST00000555037 446 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 CYP2C60P-201ENST00000566088 139 ntBASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 RN7SL753P-201ENST00000581238 290 ntBASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 SS18L2P2-201ENST00000583960 235 ntBASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 AC007349.4-201ENST00000608114 532 ntBASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 AL356274.1-201ENST00000617064 410 ntBASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 MRPL57P3-201ENST00000619218 176 ntBASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 AC112694.2-201ENST00000623697 768 ntBASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 AC073592.6-201ENST00000624271 415 ntBASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 BX649567.1-201ENST00000642071 1134 ntBASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 LINC01252-201ENST00000499291 3673 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 DCN-218ENST00000551354 2924 ntTSL 3 BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 HECTD4-211ENST00000550722 15450 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 AC092692.1-201ENST00000623625 2595 ntBASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CCM2LQ9NUG4 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 NF1-214ENST00000490416 1329 ntTSL 3 BASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.09□□□□□ -1.43
CCM2LQ9NUG4 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms