Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.76□□□□□ -1.49
PCDH9Q9HC56 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PCDH9Q9HC56 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PCDH9Q9HC56 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PCDH9Q9HC56 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
PCDH9Q9HC56 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.76□□□□□ -1.49
PCDH9Q9HC56 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.76□□□□□ -1.49
PCDH9Q9HC56 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC5.76□□□□□ -1.49
PCDH9Q9HC56 AC015689.2-201ENST00000528172 1738 ntBASIC5.76□□□□□ -1.49
PCDH9Q9HC56 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PCDH9Q9HC56 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.76□□□□□ -1.49
PCDH9Q9HC56 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
PCDH9Q9HC56 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC5.76□□□□□ -1.49
PCDH9Q9HC56 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
PCDH9Q9HC56 AC007842.1-201ENST00000597336 2039 ntBASIC5.75□□□□□ -1.49
PCDH9Q9HC56 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.75□□□□□ -1.49
PCDH9Q9HC56 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
PCDH9Q9HC56 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
PCDH9Q9HC56 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDH9Q9HC56 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDH9Q9HC56 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.75□□□□□ -1.49
PCDH9Q9HC56 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.75□□□□□ -1.49
PCDH9Q9HC56 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
PCDH9Q9HC56 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCDH9Q9HC56 CEACAMP10-201ENST00000489959 1721 ntTSL 2 BASIC5.75□□□□□ -1.49
PCDH9Q9HC56 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC5.75□□□□□ -1.49
PCDH9Q9HC56 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
PCDH9Q9HC56 SNORA64.1-201ENST00000362600 132 ntBASIC5.75□□□□□ -1.49
PCDH9Q9HC56 RNU6-386P-201ENST00000362650 107 ntBASIC5.75□□□□□ -1.49
PCDH9Q9HC56 RNA5SP394-201ENST00000364216 119 ntBASIC5.75□□□□□ -1.49
PCDH9Q9HC56 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCDH9Q9HC56 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
PCDH9Q9HC56 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
PCDH9Q9HC56 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.75□□□□□ -1.49
PCDH9Q9HC56 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.75□□□□□ -1.49
PCDH9Q9HC56 RPL7P56-201ENST00000429441 717 ntBASIC5.75□□□□□ -1.49
PCDH9Q9HC56 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.75□□□□□ -1.49
PCDH9Q9HC56 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC5.75□□□□□ -1.49
PCDH9Q9HC56 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
PCDH9Q9HC56 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.75□□□□□ -1.49
PCDH9Q9HC56 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.75□□□□□ -1.49
PCDH9Q9HC56 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.75□□□□□ -1.49
PCDH9Q9HC56 AC007998.1-201ENST00000474156 672 ntBASIC5.75□□□□□ -1.49
PCDH9Q9HC56 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC5.75□□□□□ -1.49
PCDH9Q9HC56 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.75□□□□□ -1.49
PCDH9Q9HC56 AP001267.3-204ENST00000528578 423 ntTSL 3 BASIC5.75□□□□□ -1.49
PCDH9Q9HC56 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
PCDH9Q9HC56 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.75□□□□□ -1.49
PCDH9Q9HC56 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDH9Q9HC56 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.75□□□□□ -1.49
PCDH9Q9HC56 AC090079.2-201ENST00000575289 768 ntBASIC5.75□□□□□ -1.49
PCDH9Q9HC56 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.75□□□□□ -1.49
PCDH9Q9HC56 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.75□□□□□ -1.49
PCDH9Q9HC56 AC063977.5-201ENST00000601044 974 ntBASIC5.75□□□□□ -1.49
PCDH9Q9HC56 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.75□□□□□ -1.49
PCDH9Q9HC56 AC092953.2-201ENST00000608000 699 ntBASIC5.75□□□□□ -1.49
PCDH9Q9HC56 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.75□□□□□ -1.49
PCDH9Q9HC56 AC020978.9-201ENST00000624380 1141 ntBASIC5.75□□□□□ -1.49
PCDH9Q9HC56 AC004808.2-201ENST00000627965 773 ntBASIC5.75□□□□□ -1.49
PCDH9Q9HC56 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.75□□□□□ -1.49
PCDH9Q9HC56 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCDH9Q9HC56 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.75□□□□□ -1.49
PCDH9Q9HC56 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
PCDH9Q9HC56 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.75□□□□□ -1.49
PCDH9Q9HC56 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.75□□□□□ -1.49
PCDH9Q9HC56 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
PCDH9Q9HC56 AC093671.1-201ENST00000624981 2929 ntBASIC5.75□□□□□ -1.49
PCDH9Q9HC56 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.74□□□□□ -1.49
PCDH9Q9HC56 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.74□□□□□ -1.49
PCDH9Q9HC56 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDH9Q9HC56 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDH9Q9HC56 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDH9Q9HC56 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
PCDH9Q9HC56 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.74□□□□□ -1.49
PCDH9Q9HC56 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDH9Q9HC56 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC5.74□□□□□ -1.49
PCDH9Q9HC56 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDH9Q9HC56 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.74□□□□□ -1.49
PCDH9Q9HC56 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDH9Q9HC56 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDH9Q9HC56 RNA5SP284-201ENST00000384547 118 ntBASIC5.74□□□□□ -1.49
PCDH9Q9HC56 AC013470.3-201ENST00000420252 1194 ntBASIC5.74□□□□□ -1.49
PCDH9Q9HC56 C9orf57-202ENST00000424431 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
PCDH9Q9HC56 BX119321.1-201ENST00000428912 797 ntBASIC5.74□□□□□ -1.49
PCDH9Q9HC56 PCBP1-AS1-224ENST00000429599 1045 ntTSL 5 BASIC5.74□□□□□ -1.49
PCDH9Q9HC56 AC079807.1-201ENST00000429993 481 ntBASIC5.74□□□□□ -1.49
PCDH9Q9HC56 RPL23AP19-201ENST00000436229 369 ntBASIC5.74□□□□□ -1.49
PCDH9Q9HC56 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.74□□□□□ -1.49
PCDH9Q9HC56 AC073109.1-201ENST00000445066 978 ntBASIC5.74□□□□□ -1.49
PCDH9Q9HC56 AC144530.1-201ENST00000452862 555 ntBASIC5.74□□□□□ -1.49
PCDH9Q9HC56 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.74□□□□□ -1.49
PCDH9Q9HC56 AC025181.1-201ENST00000477507 416 ntBASIC5.74□□□□□ -1.49
PCDH9Q9HC56 RPS3AP15-201ENST00000483874 781 ntBASIC5.74□□□□□ -1.49
PCDH9Q9HC56 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC5.74□□□□□ -1.49
PCDH9Q9HC56 AC090568.1-201ENST00000509499 856 ntBASIC5.74□□□□□ -1.49
PCDH9Q9HC56 AC091912.1-201ENST00000511351 248 ntBASIC5.74□□□□□ -1.49
PCDH9Q9HC56 CYCSP22-201ENST00000517555 339 ntBASIC5.74□□□□□ -1.49
PCDH9Q9HC56 AC022826.1-201ENST00000519383 805 ntBASIC5.74□□□□□ -1.49
PCDH9Q9HC56 TRIM51DP-201ENST00000529746 596 ntBASIC5.74□□□□□ -1.49
PCDH9Q9HC56 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms