Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 IFNK-201ENST00000276943 1140 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 FAM3C2-201ENST00000312214 681 ntBASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 UBBP1-201ENST00000392399 473 ntBASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 HMGB1P10-201ENST00000395823 563 ntBASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 AL391422.1-201ENST00000402155 436 ntBASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 MTND4LP20-201ENST00000402379 270 ntBASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 AL359694.1-201ENST00000403247 604 ntBASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 AL390774.1-201ENST00000411924 246 ntBASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 RPS7P9-201ENST00000414704 586 ntBASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 AC246680.2-201ENST00000422106 389 ntBASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 AHCYP8-201ENST00000425108 209 ntBASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 GCA-203ENST00000429691 824 ntTSL 3 BASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 AC244035.1-201ENST00000430042 390 ntBASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 RAB9AP5-201ENST00000437794 597 ntBASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 RAB9AP2-201ENST00000443911 597 ntBASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 SCG5-207ENST00000497208 949 ntTSL 5 BASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 AC104685.1-201ENST00000502445 371 ntBASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 IGLVVII-41-1-201ENST00000518405 151 ntBASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 C1GALT1P3-201ENST00000522049 819 ntBASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 IGLV3-6-201ENST00000523937 250 ntBASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 AP000662.1-201ENST00000530952 487 ntBASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 AP000619.2-201ENST00000546014 969 ntBASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 AC012555.2-201ENST00000549448 413 ntTSL 3 BASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 GNG2-203ENST00000553432 577 ntTSL 4 BASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 AC099518.4-204ENST00000567047 380 ntTSL 2 BASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 AC027796.1-201ENST00000575593 512 ntBASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 AC067852.5-201ENST00000589299 310 ntBASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 VN1R83P-201ENST00000595685 445 ntBASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 VN1R82P-201ENST00000601481 356 ntBASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 IGKV2OR2-7-201ENST00000604652 304 ntBASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 AL138693.1-201ENST00000622219 129 ntBASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 AC024595.1-201ENST00000623088 387 ntBASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 AC068137.3-201ENST00000639191 341 ntBASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 AC099654.15-201ENST00000639802 509 ntBASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 AC073869.6-201ENST00000640656 341 ntBASIC5.9□□□□□ -1.46
SEC61A2Q9H9S3 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.47
SEC61A2Q9H9S3 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC5.9□□□□□ -1.47
SEC61A2Q9H9S3 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
SEC61A2Q9H9S3 C2CD6-201ENST00000286195 2104 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
SEC61A2Q9H9S3 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC5.9□□□□□ -1.47
SEC61A2Q9H9S3 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SEC61A2Q9H9S3 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SEC61A2Q9H9S3 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
SEC61A2Q9H9S3 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
SEC61A2Q9H9S3 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC5.9□□□□□ -1.47
SEC61A2Q9H9S3 AC020658.2-201ENST00000559030 4020 ntBASIC5.9□□□□□ -1.47
SEC61A2Q9H9S3 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 SEPT7-AS1-203ENST00000437235 3810 ntTSL 5 BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 CASC19-228ENST00000641414 1684 ntBASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 SNORA38B-201ENST00000363524 131 ntBASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 SNORA7A-201ENST00000384765 139 ntBASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.89□□□□□ -1.47
SEC61A2Q9H9S3 MTCO1P56-201ENST00000401674 224 ntBASIC5.89□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 365.4 ms