Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
SMIM3Q9BZL3 AC025574.2-201ENST00000615621 514 ntBASIC4.31□□□□□ -1.72
SMIM3Q9BZL3 AP005431.1-201ENST00000618479 319 ntBASIC4.31□□□□□ -1.72
SMIM3Q9BZL3 AC022106.2-201ENST00000620114 757 ntBASIC4.31□□□□□ -1.72
SMIM3Q9BZL3 AC022919.1-201ENST00000624979 626 ntBASIC4.31□□□□□ -1.72
SMIM3Q9BZL3 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
SMIM3Q9BZL3 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.31□□□□□ -1.72
SMIM3Q9BZL3 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SMIM3Q9BZL3 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SMIM3Q9BZL3 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
SMIM3Q9BZL3 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SMIM3Q9BZL3 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC4.31□□□□□ -1.72
SMIM3Q9BZL3 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
SMIM3Q9BZL3 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
SMIM3Q9BZL3 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.31□□□□□ -1.72
SMIM3Q9BZL3 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
SMIM3Q9BZL3 AC139713.2-215ENST00000641428 5037 ntBASIC4.31□□□□□ -1.72
SMIM3Q9BZL3 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 TINAG-203ENST00000370869 782 ntTSL 3 BASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 AC233289.1-201ENST00000403700 508 ntBASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 FTH1P26-201ENST00000406512 701 ntBASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 RN7SKP97-201ENST00000410966 333 ntBASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 RNU2-22P-201ENST00000411266 212 ntBASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 AC013429.2-201ENST00000418798 781 ntBASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 KCTD9P1-201ENST00000430462 1167 ntBASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 AL136455.1-201ENST00000441083 1240 ntBASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 AC068491.1-201ENST00000449539 1241 ntBASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 AL591623.2-201ENST00000449978 222 ntBASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 AL591473.1-201ENST00000464297 313 ntBASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 AC092754.1-201ENST00000472975 479 ntBASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 AC135999.1-201ENST00000478962 479 ntBASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 RN7SL267P-201ENST00000485107 261 ntBASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 RN7SL814P-201ENST00000487715 300 ntBASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 RN7SL447P-201ENST00000494711 245 ntBASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 AC093890.1-201ENST00000502554 540 ntBASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 AC138409.2-202ENST00000507274 458 ntBASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 AC131935.1-201ENST00000524621 333 ntBASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 AP001372.3-201ENST00000530510 609 ntTSL 2 BASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 AC015674.1-201ENST00000578482 267 ntBASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 AC004839.1-201ENST00000610269 501 ntBASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 BX005214.3-202ENST00000619809 325 ntBASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 AP003400.3-201ENST00000624904 346 ntBASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 VCAM1-203ENST00000370115 2475 ntTSL 5 BASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 MAPK10-349ENST00000641767 3661 ntBASIC4.3□□□□□ -1.72
SMIM3Q9BZL3 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC4.29□□□□□ -1.72
SMIM3Q9BZL3 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
SMIM3Q9BZL3 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC4.29□□□□□ -1.72
SMIM3Q9BZL3 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SMIM3Q9BZL3 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SMIM3Q9BZL3 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.29□□□□□ -1.72
SMIM3Q9BZL3 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SMIM3Q9BZL3 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
SMIM3Q9BZL3 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SMIM3Q9BZL3 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC4.29□□□□□ -1.72
SMIM3Q9BZL3 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC4.29□□□□□ -1.72
SMIM3Q9BZL3 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SMIM3Q9BZL3 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
SMIM3Q9BZL3 RN7SKP153-201ENST00000365026 316 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms