Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 PROS2P-201ENST00000474651 1951 ntBASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 RAET1L-201ENST00000286380 802 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 RNA5SP514-201ENST00000363717 111 ntBASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 C1orf105-201ENST00000367725 888 ntTSL 2 BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 RNA5SP53-201ENST00000391299 120 ntBASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 LDHAP5-201ENST00000394996 622 ntBASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 GGA1-205ENST00000405147 575 ntTSL 4 BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 MIR1302-8-201ENST00000408342 128 ntBASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 SNORA11C-201ENST00000408532 129 ntBASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 RNA5SP280-201ENST00000411230 115 ntBASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 RNU6-575P-201ENST00000411326 105 ntBASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 RPL18AP14-201ENST00000417685 526 ntBASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 SMARCE1P1-201ENST00000417747 1186 ntBASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 AC006509.1-201ENST00000420788 634 ntBASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 RPL7P53-201ENST00000421245 739 ntBASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 RSL24D1P3-201ENST00000449255 495 ntBASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 IGHVIII-38-1-201ENST00000521454 282 ntBASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 AC092747.2-201ENST00000545069 983 ntBASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 AP000619.2-201ENST00000546014 969 ntBASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 AC069240.2-201ENST00000550242 609 ntBASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 AC008015.1-201ENST00000555505 465 ntBASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 AL031846.1-201ENST00000560933 314 ntBASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 AL078623.1-201ENST00000602702 907 ntBASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 AC009779.8-202ENST00000607990 932 ntBASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 AP005137.2-201ENST00000609238 400 ntBASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 AL603755.1-201ENST00000619504 163 ntBASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 AC087894.3-201ENST00000623682 349 ntBASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 PCBP1-AS1-359ENST00000630283 1063 ntTSL 5 BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 OR8B1P-202ENST00000641132 1178 ntBASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 GPR89A-203ENST00000462900 1527 ntTSL 2 BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TRIM55Q9BYV6 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TRIM55Q9BYV6 AP005901.5-201ENST00000545779 1796 ntBASIC6.69□□□□□ -1.34
TRIM55Q9BYV6 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
TRIM55Q9BYV6 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
TRIM55Q9BYV6 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TRIM55Q9BYV6 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
TRIM55Q9BYV6 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.69□□□□□ -1.34
TRIM55Q9BYV6 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.69□□□□□ -1.34
TRIM55Q9BYV6 AKAP17BP-201ENST00000431706 2719 ntBASIC6.69□□□□□ -1.34
TRIM55Q9BYV6 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.69□□□□□ -1.34
TRIM55Q9BYV6 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
TRIM55Q9BYV6 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
TRIM55Q9BYV6 AC092634.1-201ENST00000366505 199 ntBASIC6.69□□□□□ -1.34
TRIM55Q9BYV6 MLXIP-203ENST00000377037 805 ntTSL 5 BASIC6.69□□□□□ -1.34
TRIM55Q9BYV6 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
TRIM55Q9BYV6 SNORD116-1-201ENST00000384335 95 ntBASIC6.69□□□□□ -1.34
TRIM55Q9BYV6 MIR191-201ENST00000384873 92 ntBASIC6.69□□□□□ -1.34
TRIM55Q9BYV6 MIR152-201ENST00000385212 87 ntBASIC6.69□□□□□ -1.34
TRIM55Q9BYV6 AC093719.1-202ENST00000392735 373 ntBASIC6.69□□□□□ -1.34
TRIM55Q9BYV6 AL359922.1-201ENST00000404796 935 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
TRIM55Q9BYV6 RNA5SP251-201ENST00000410614 137 ntBASIC6.69□□□□□ -1.34
TRIM55Q9BYV6 RNU4-72P-201ENST00000410754 173 ntBASIC6.69□□□□□ -1.34
TRIM55Q9BYV6 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC6.69□□□□□ -1.34
TRIM55Q9BYV6 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC6.69□□□□□ -1.34
TRIM55Q9BYV6 USP9YP26-201ENST00000421008 661 ntBASIC6.69□□□□□ -1.34
TRIM55Q9BYV6 RPL24P2-201ENST00000421023 475 ntBASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms