Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 AC093909.5-201ENST00000621839 1799 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 AC092821.3-202ENST00000641304 2767 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 C2CD6-203ENST00000439802 1639 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 MROH3P-201ENST00000435735 2676 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 AL031651.1-201ENST00000615357 1438 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 AP2B1-215ENST00000616681 3267 ntTSL 2 BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 AL391994.1-201ENST00000254724 282 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 IL6STP1-201ENST00000346911 1020 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 YWHAZP4-201ENST00000392459 708 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 HMGB3P18-201ENST00000406327 590 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 RAP1BP3-201ENST00000407180 549 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 AL353133.1-201ENST00000407695 401 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 MIR4435-2HG-203ENST00000409569 514 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 RPS21P8-201ENST00000413365 247 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 XIST-201ENST00000416330 750 ntTSL 2 BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 RPL30P16-201ENST00000419341 429 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 AC006509.1-201ENST00000420788 634 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 OR5W1P-201ENST00000423705 938 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 AC239367.3-201ENST00000428996 814 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 AC005083.1-202ENST00000430859 740 ntTSL 2 BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 AC092641.1-201ENST00000440229 772 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 UBQLN1P1-207ENST00000441056 1169 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 E2F6P3-201ENST00000441743 743 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 PFN1P11-201ENST00000445829 389 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 NPM1P9-201ENST00000453156 844 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 RPL31P11-202ENST00000454082 372 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 RPS27AP2-201ENST00000457576 465 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 RNU6-956P-201ENST00000458868 103 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 RPL7P1-201ENST00000468161 747 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 RPL7P9-201ENST00000468715 747 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 RN7SL37P-201ENST00000490461 307 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 PSMA2P2-201ENST00000504319 686 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 MTATP6P22-201ENST00000507369 598 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 MINOS1P4-201ENST00000515470 318 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 NREP-223ENST00000515855 801 ntTSL 4 BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 AP000662.1-201ENST00000530952 487 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 AP000873.5-201ENST00000533906 236 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 AL591767.3-201ENST00000554632 525 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 NUDT7-206ENST00000568787 678 ntTSL 2 BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 MTCO1P40-201ENST00000574371 625 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 MIR3912-201ENST00000577566 105 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 SNORA70D-201ENST00000578836 135 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 AC015911.2-201ENST00000585536 396 ntTSL 3 BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 AL049840.5-201ENST00000602827 552 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 WISP1-OT1-201ENST00000602893 642 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 AL135786.2-201ENST00000608422 615 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 AC108673.3-201ENST00000609183 335 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 AC091768.1-201ENST00000609258 930 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 AC097505.1-201ENST00000610199 565 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 AC024023.1-201ENST00000624530 922 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 AC019226.1-201ENST00000625666 515 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 AC068137.3-201ENST00000639191 341 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 AC073869.6-201ENST00000640656 341 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 MFSD8-245ENST00000641743 948 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 AL359195.2-201ENST00000623657 4412 ntBASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 TRIP12-201ENST00000283943 9874 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
PTCHD1Q96NR3 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PTCHD1Q96NR3 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PTCHD1Q96NR3 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.35□□□□□ -1.39
PTCHD1Q96NR3 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
PTCHD1Q96NR3 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
PTCHD1Q96NR3 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
PTCHD1Q96NR3 EPHA3-203ENST00000494014 3085 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms