Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 AL158062.1-201ENST00000619632 745 ntBASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 AL133370.2-201ENST00000619934 439 ntBASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 AC129778.1-202ENST00000623812 261 ntBASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 AL591379.1-207ENST00000635982 261 ntBASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 AC009452.1-201ENST00000640823 606 ntBASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 AC073869.7-201ENST00000640874 297 ntBASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
CDK5RAP3Q96JB5 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
CDK5RAP3Q96JB5 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
CDK5RAP3Q96JB5 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.59□□□□□ -1.36
CDK5RAP3Q96JB5 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 AP001284.1-201ENST00000528393 2118 ntBASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 FBXL21-201ENST00000297158 1305 ntBASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 GLUD1P9-201ENST00000420997 1173 ntBASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 BX284632.2-201ENST00000421091 399 ntBASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 AC092651.1-201ENST00000426110 312 ntBASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 MTCYBP32-201ENST00000427945 1084 ntBASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 AL512637.2-201ENST00000431287 1256 ntBASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 USP24P1-201ENST00000433802 779 ntBASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 AC096775.1-201ENST00000437724 448 ntBASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 AL512605.1-202ENST00000441919 381 ntBASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 AL359955.2-201ENST00000445380 353 ntBASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 ACA64.1-201ENST00000459171 127 ntBASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 RN7SL193P-201ENST00000491708 276 ntBASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 HMGB1P3-201ENST00000502802 616 ntBASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 AC078899.1-201ENST00000521432 1185 ntBASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 PCNAP4-201ENST00000532690 730 ntBASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 UBTFL9-201ENST00000534504 1148 ntBASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 LRTOMT-215ENST00000538478 814 ntTSL 2 BASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 AC093014.1-201ENST00000548926 724 ntBASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 DUX4L52-201ENST00000549363 777 ntBASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 AC107958.1-201ENST00000556576 290 ntBASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 AC023158.1-201ENST00000561632 1025 ntBASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 AC005726.4-201ENST00000582858 458 ntBASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 MIR4420-201ENST00000583944 77 ntBASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 AC009237.12-201ENST00000604755 742 ntBASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 FAM27E4-201ENST00000605259 342 ntBASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 AL592494.3-201ENST00000609485 464 ntBASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 AL352984.2-202ENST00000613699 155 ntBASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 MIR6071-201ENST00000616741 78 ntBASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 AL356118.1-201ENST00000635272 1078 ntBASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 OR11H2-202ENST00000641517 1085 ntBASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 OR5AC4P-202ENST00000642086 985 ntBASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 PLEKHS1-205ENST00000369312 3443 ntTSL 2 BASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 AL356317.1-201ENST00000396110 1436 ntBASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.58□□□□□ -1.36
CDK5RAP3Q96JB5 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDK5RAP3Q96JB5 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CDK5RAP3Q96JB5 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDK5RAP3Q96JB5 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CDK5RAP3Q96JB5 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CDK5RAP3Q96JB5 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.57□□□□□ -1.36
CDK5RAP3Q96JB5 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CDK5RAP3Q96JB5 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC6.57□□□□□ -1.36
CDK5RAP3Q96JB5 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CDK5RAP3Q96JB5 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC6.57□□□□□ -1.36
CDK5RAP3Q96JB5 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CDK5RAP3Q96JB5 RNU6-1251P-201ENST00000364502 107 ntBASIC6.57□□□□□ -1.36
CDK5RAP3Q96JB5 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 113.8 ms