Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 AC134980.1-214ENST00000638815 687 ntTSL 5 BASIC5.49□□□□□ -1.53
VPS33AQ96AX1 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.49□□□□□ -1.53
VPS33AQ96AX1 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VPS33AQ96AX1 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
VPS33AQ96AX1 AASDH-201ENST00000205214 3590 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
VPS33AQ96AX1 AC117409.1-201ENST00000470499 1310 ntBASIC5.48□□□□□ -1.53
VPS33AQ96AX1 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.48□□□□□ -1.53
VPS33AQ96AX1 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VPS33AQ96AX1 AC007938.2-201ENST00000604666 2634 ntBASIC5.48□□□□□ -1.53
VPS33AQ96AX1 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
VPS33AQ96AX1 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VPS33AQ96AX1 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS33AQ96AX1 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VPS33AQ96AX1 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VPS33AQ96AX1 GRAMD2B-202ENST00000502348 1363 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS33AQ96AX1 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VPS33AQ96AX1 AL589826.1-201ENST00000340697 249 ntBASIC5.48□□□□□ -1.53
VPS33AQ96AX1 RNA5SP326-201ENST00000363209 110 ntBASIC5.48□□□□□ -1.53
VPS33AQ96AX1 SNORA70.6-201ENST00000383934 134 ntBASIC5.48□□□□□ -1.53
VPS33AQ96AX1 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
VPS33AQ96AX1 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS33AQ96AX1 CR848007.2-201ENST00000424918 787 ntBASIC5.48□□□□□ -1.53
VPS33AQ96AX1 DEFA9P-201ENST00000433042 285 ntBASIC5.48□□□□□ -1.53
VPS33AQ96AX1 GAPDHP48-201ENST00000436626 961 ntBASIC5.48□□□□□ -1.53
VPS33AQ96AX1 AC245517.2-201ENST00000442890 346 ntBASIC5.48□□□□□ -1.53
VPS33AQ96AX1 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.48□□□□□ -1.53
VPS33AQ96AX1 HESX1-202ENST00000473921 757 ntTSL 5 BASIC5.48□□□□□ -1.53
VPS33AQ96AX1 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VPS33AQ96AX1 AC090543.1-201ENST00000492168 485 ntBASIC5.48□□□□□ -1.53
VPS33AQ96AX1 AC015864.1-201ENST00000496512 544 ntBASIC5.48□□□□□ -1.53
VPS33AQ96AX1 AL158068.1-201ENST00000506116 616 ntBASIC5.48□□□□□ -1.53
VPS33AQ96AX1 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS33AQ96AX1 AC108103.1-201ENST00000511286 446 ntBASIC5.48□□□□□ -1.53
VPS33AQ96AX1 RPS27AP18-201ENST00000515536 459 ntBASIC5.48□□□□□ -1.53
VPS33AQ96AX1 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.48□□□□□ -1.53
VPS33AQ96AX1 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
VPS33AQ96AX1 AC090791.1-201ENST00000530960 492 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS33AQ96AX1 AP004609.2-201ENST00000532177 190 ntBASIC5.48□□□□□ -1.53
VPS33AQ96AX1 RAB30-209ENST00000532548 644 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS33AQ96AX1 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS33AQ96AX1 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.48□□□□□ -1.53
VPS33AQ96AX1 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS33AQ96AX1 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS33AQ96AX1 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.48□□□□□ -1.53
VPS33AQ96AX1 TEX41-218ENST00000596540 882 ntTSL 5 BASIC5.48□□□□□ -1.53
VPS33AQ96AX1 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VPS33AQ96AX1 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.48□□□□□ -1.53
VPS33AQ96AX1 AC015819.1-201ENST00000613588 663 ntBASIC5.48□□□□□ -1.53
VPS33AQ96AX1 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VPS33AQ96AX1 FAM27E2-201ENST00000619668 403 ntBASIC5.48□□□□□ -1.53
VPS33AQ96AX1 AL136228.1-201ENST00000622221 319 ntBASIC5.48□□□□□ -1.53
VPS33AQ96AX1 AC022021.1-201ENST00000634334 843 ntTSL 5 BASIC5.48□□□□□ -1.53
VPS33AQ96AX1 AL357140.4-201ENST00000636827 412 ntBASIC5.48□□□□□ -1.53
VPS33AQ96AX1 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VPS33AQ96AX1 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
VPS33AQ96AX1 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VPS33AQ96AX1 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
VPS33AQ96AX1 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VPS33AQ96AX1 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VPS33AQ96AX1 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
VPS33AQ96AX1 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
VPS33AQ96AX1 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS33AQ96AX1 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS33AQ96AX1 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.48□□□□□ -1.53
VPS33AQ96AX1 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS33AQ96AX1 AC068870.1-201ENST00000563737 2455 ntBASIC5.48□□□□□ -1.53
VPS33AQ96AX1 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC5.48□□□□□ -1.53
VPS33AQ96AX1 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
VPS33AQ96AX1 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
VPS33AQ96AX1 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VPS33AQ96AX1 AL138820.1-201ENST00000617901 5305 ntBASIC5.47□□□□□ -1.53
VPS33AQ96AX1 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.47□□□□□ -1.53
VPS33AQ96AX1 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VPS33AQ96AX1 TTC39DP-201ENST00000416781 1688 ntBASIC5.47□□□□□ -1.53
VPS33AQ96AX1 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VPS33AQ96AX1 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VPS33AQ96AX1 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
VPS33AQ96AX1 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
VPS33AQ96AX1 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VPS33AQ96AX1 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VPS33AQ96AX1 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VPS33AQ96AX1 RNA5SP279-201ENST00000365513 117 ntBASIC5.47□□□□□ -1.53
VPS33AQ96AX1 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
VPS33AQ96AX1 AC079809.1-201ENST00000415468 276 ntBASIC5.47□□□□□ -1.53
VPS33AQ96AX1 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.47□□□□□ -1.53
VPS33AQ96AX1 AC108479.1-201ENST00000431142 427 ntBASIC5.47□□□□□ -1.53
VPS33AQ96AX1 OR7E116P-201ENST00000448529 957 ntBASIC5.47□□□□□ -1.53
VPS33AQ96AX1 RPL29P23-201ENST00000486188 442 ntBASIC5.47□□□□□ -1.53
VPS33AQ96AX1 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.47□□□□□ -1.53
VPS33AQ96AX1 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.47□□□□□ -1.53
VPS33AQ96AX1 AC093770.1-201ENST00000511559 571 ntBASIC5.47□□□□□ -1.53
VPS33AQ96AX1 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.47□□□□□ -1.53
VPS33AQ96AX1 RNU6-889P-201ENST00000517189 103 ntBASIC5.47□□□□□ -1.53
VPS33AQ96AX1 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.47□□□□□ -1.53
VPS33AQ96AX1 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.47□□□□□ -1.53
VPS33AQ96AX1 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.47□□□□□ -1.53
VPS33AQ96AX1 AC139697.1-201ENST00000548429 745 ntBASIC5.47□□□□□ -1.53
VPS33AQ96AX1 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
VPS33AQ96AX1 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC5.47□□□□□ -1.53
VPS33AQ96AX1 DHFRP1-201ENST00000579682 559 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms