Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC6.79□□□□□ -1.32
ERCC4Q92889 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.79□□□□□ -1.32
ERCC4Q92889 AC138207.8-204ENST00000579588 527 ntBASIC6.79□□□□□ -1.32
ERCC4Q92889 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.79□□□□□ -1.32
ERCC4Q92889 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC6.79□□□□□ -1.32
ERCC4Q92889 AC079880.2-201ENST00000603790 1213 ntBASIC6.79□□□□□ -1.32
ERCC4Q92889 AC064807.4-201ENST00000607201 407 ntBASIC6.79□□□□□ -1.32
ERCC4Q92889 AL157392.4-201ENST00000609756 345 ntBASIC6.79□□□□□ -1.32
ERCC4Q92889 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.79□□□□□ -1.32
ERCC4Q92889 AC017104.5-201ENST00000637647 639 ntBASIC6.79□□□□□ -1.32
ERCC4Q92889 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.79□□□□□ -1.32
ERCC4Q92889 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.79□□□□□ -1.32
ERCC4Q92889 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.79□□□□□ -1.32
ERCC4Q92889 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.79□□□□□ -1.32
ERCC4Q92889 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
ERCC4Q92889 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
ERCC4Q92889 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
ERCC4Q92889 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.79□□□□□ -1.32
ERCC4Q92889 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
ERCC4Q92889 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
ERCC4Q92889 AC012078.1-201ENST00000405035 1646 ntBASIC6.79□□□□□ -1.32
ERCC4Q92889 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.79□□□□□ -1.32
ERCC4Q92889 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
ERCC4Q92889 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
ERCC4Q92889 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC6.79□□□□□ -1.32
ERCC4Q92889 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC6.79□□□□□ -1.32
ERCC4Q92889 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
ERCC4Q92889 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
ERCC4Q92889 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.32
ERCC4Q92889 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
ERCC4Q92889 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.78□□□□□ -1.32
ERCC4Q92889 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.78□□□□□ -1.32
ERCC4Q92889 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
ERCC4Q92889 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
ERCC4Q92889 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
ERCC4Q92889 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
ERCC4Q92889 AC097063.1-201ENST00000426714 1797 ntBASIC6.78□□□□□ -1.32
ERCC4Q92889 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
ERCC4Q92889 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
ERCC4Q92889 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.78□□□□□ -1.32
ERCC4Q92889 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
ERCC4Q92889 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.78□□□□□ -1.32
ERCC4Q92889 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.78□□□□□ -1.32
ERCC4Q92889 AL096829.1-201ENST00000413677 457 ntBASIC6.78□□□□□ -1.32
ERCC4Q92889 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
ERCC4Q92889 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.78□□□□□ -1.32
ERCC4Q92889 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.78□□□□□ -1.32
ERCC4Q92889 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
ERCC4Q92889 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.78□□□□□ -1.32
ERCC4Q92889 AC245047.2-201ENST00000441060 530 ntBASIC6.78□□□□□ -1.32
ERCC4Q92889 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.78□□□□□ -1.32
ERCC4Q92889 RAB28P3-201ENST00000448325 597 ntBASIC6.78□□□□□ -1.32
ERCC4Q92889 SDC4P-201ENST00000453285 601 ntBASIC6.78□□□□□ -1.32
ERCC4Q92889 AC104849.1-201ENST00000462623 405 ntBASIC6.78□□□□□ -1.32
ERCC4Q92889 RPL21P18-201ENST00000469899 480 ntBASIC6.78□□□□□ -1.32
ERCC4Q92889 CYCSP20-201ENST00000473154 315 ntBASIC6.78□□□□□ -1.32
ERCC4Q92889 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC6.78□□□□□ -1.32
ERCC4Q92889 AC016687.1-201ENST00000482574 353 ntBASIC6.78□□□□□ -1.32
ERCC4Q92889 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC6.78□□□□□ -1.32
ERCC4Q92889 CCDC11P1-201ENST00000503137 1162 ntBASIC6.78□□□□□ -1.32
ERCC4Q92889 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.78□□□□□ -1.32
ERCC4Q92889 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC6.78□□□□□ -1.32
ERCC4Q92889 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC6.78□□□□□ -1.32
ERCC4Q92889 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC6.78□□□□□ -1.32
ERCC4Q92889 RNA5SP434-201ENST00000516647 121 ntBASIC6.78□□□□□ -1.32
ERCC4Q92889 CYCSP25-201ENST00000525280 316 ntBASIC6.78□□□□□ -1.32
ERCC4Q92889 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
ERCC4Q92889 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC6.78□□□□□ -1.32
ERCC4Q92889 AC008147.3-201ENST00000548666 354 ntBASIC6.78□□□□□ -1.32
ERCC4Q92889 NPM1P5-201ENST00000557228 838 ntBASIC6.78□□□□□ -1.32
ERCC4Q92889 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC6.78□□□□□ -1.32
ERCC4Q92889 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
ERCC4Q92889 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.78□□□□□ -1.32
ERCC4Q92889 NPM1P42-201ENST00000560329 862 ntBASIC6.78□□□□□ -1.32
ERCC4Q92889 AC011473.1-201ENST00000601280 443 ntTSL 2 BASIC6.78□□□□□ -1.32
ERCC4Q92889 SMIM12P1-201ENST00000603004 274 ntBASIC6.78□□□□□ -1.32
ERCC4Q92889 MTCO3P22-201ENST00000603219 784 ntBASIC6.78□□□□□ -1.32
ERCC4Q92889 OR7A19P-201ENST00000608051 733 ntBASIC6.78□□□□□ -1.32
ERCC4Q92889 MIR6823-201ENST00000622118 61 ntBASIC6.78□□□□□ -1.32
ERCC4Q92889 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC6.78□□□□□ -1.32
ERCC4Q92889 AC112694.2-201ENST00000623697 768 ntBASIC6.78□□□□□ -1.32
ERCC4Q92889 AP003399.1-201ENST00000637534 361 ntBASIC6.78□□□□□ -1.32
ERCC4Q92889 AC068137.4-201ENST00000638485 296 ntBASIC6.78□□□□□ -1.32
ERCC4Q92889 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
ERCC4Q92889 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
ERCC4Q92889 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
ERCC4Q92889 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
ERCC4Q92889 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC6.78□□□□□ -1.32
ERCC4Q92889 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC6.78□□□□□ -1.32
ERCC4Q92889 ICE2P1-201ENST00000512800 1849 ntBASIC6.78□□□□□ -1.32
ERCC4Q92889 AC068870.3-201ENST00000625077 2536 ntBASIC6.78□□□□□ -1.32
ERCC4Q92889 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
ERCC4Q92889 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.78□□□□□ -1.32
ERCC4Q92889 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
ERCC4Q92889 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
ERCC4Q92889 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.77□□□□□ -1.32
ERCC4Q92889 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC6.77□□□□□ -1.33
ERCC4Q92889 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
ERCC4Q92889 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.77□□□□□ -1.33
ERCC4Q92889 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.77□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms