Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 AL132857.1-201ENST00000555180 708 ntBASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 AC090666.1-201ENST00000578241 445 ntBASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 AC134669.1-201ENST00000581275 672 ntBASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 AC007448.1-201ENST00000582714 234 ntBASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 AC008536.1-201ENST00000602872 669 ntBASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 AC005252.1-201ENST00000604518 1063 ntBASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 AC245389.2-201ENST00000616023 576 ntBASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 AC231759.1-201ENST00000616455 597 ntBASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 AC242843.1-201ENST00000618702 573 ntBASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 AP001962.1-201ENST00000624114 559 ntBASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 AL390862.1-201ENST00000635467 1469 ntBASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 AC074141.1-201ENST00000588129 2995 ntBASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 ZNF90P1-201ENST00000480493 1951 ntBASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 MTND4P5-201ENST00000435821 1374 ntBASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
SIMC1Q8NDZ2 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 AL133243.2-201ENST00000610331 1621 ntBASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 AC079298.1-201ENST00000625026 1619 ntBASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 LINC00704-201ENST00000430998 1478 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 RPL11P4-201ENST00000332269 436 ntBASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 SNORD16-201ENST00000362803 99 ntBASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 RNU5E-10P-201ENST00000363506 118 ntBASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 Y_RNA.318-201ENST00000365131 97 ntBASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 CASP3-203ENST00000393588 677 ntTSL 4 BASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 TAF9BP2-201ENST00000400856 499 ntBASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 TATDN1P1-201ENST00000414123 891 ntBASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 RPL21P50-201ENST00000417698 477 ntBASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 GPN3P1-201ENST00000423883 535 ntBASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 RPS7P14-201ENST00000426405 583 ntBASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 BX119321.1-201ENST00000428912 797 ntBASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 RPS6P15-201ENST00000431996 751 ntBASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 RPSAP32-201ENST00000432681 526 ntBASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 MTND1P29-201ENST00000448112 647 ntBASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 OR2AF1P-201ENST00000454899 889 ntBASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 SYT14P1-201ENST00000481459 721 ntBASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 RPS27P20-201ENST00000492051 246 ntBASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 AC026782.2-201ENST00000510845 636 ntBASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 AC023968.1-201ENST00000560719 475 ntBASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 AC007494.1-201ENST00000562293 760 ntBASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 AC233702.7-202ENST00000582941 211 ntBASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.92□□□□□ -1.46
SIMC1Q8NDZ2 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms