Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 AC104581.5-201ENST00000624171 7141 ntBASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 AC087477.2-202ENST00000558499 4856 ntTSL 4 BASIC7.26□□□□□ -1.25
DEPDC4Q8N2C3 TPD52-203ENST00000448733 4339 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 AC090017.1-201ENST00000548612 1779 ntBASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 IYD-202ENST00000344419 8742 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 PTK2-240ENST00000522684 4955 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 TDRD1-201ENST00000251864 4510 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 UTY-216ENST00000624098 3636 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 CDYLP1-201ENST00000419017 1458 ntBASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 AC104083.1-201ENST00000569449 2615 ntBASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 PDE7A-202ENST00000396642 2986 ntTSL 2 BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 RAB13-205ENST00000614713 1353 ntTSL 5 BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 AC026398.1-201ENST00000413683 3126 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 SNRPEP3-201ENST00000338402 276 ntBASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 RNU6-251P-201ENST00000363235 104 ntBASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 ATP5J2-203ENST00000394186 305 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 TRIB2-203ENST00000405331 830 ntTSL 2 BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 MIR1305-201ENST00000408300 86 ntBASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 RNU2-65P-201ENST00000410162 185 ntBASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 AC009743.1-201ENST00000415774 610 ntTSL 5 BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 RPS3AP9-201ENST00000417027 792 ntBASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 ZNF90P2-204ENST00000419323 1075 ntBASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 AC008155.1-201ENST00000421078 329 ntBASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 AL713965.1-201ENST00000421166 230 ntTSL 5 BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 FAM41AY1-201ENST00000421205 906 ntTSL 5 BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 CHCHD3P1-201ENST00000425516 676 ntBASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 NPM1P24-201ENST00000428039 894 ntBASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 RPL37A-204ENST00000441179 529 ntTSL 5 BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 NDUFA5P7-201ENST00000452914 242 ntBASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 AL135908.1-202ENST00000454135 562 ntTSL 2 BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 PTMAP1-205ENST00000455552 325 ntBASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 FAM41AY2-201ENST00000458627 906 ntTSL 5 BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 MEMO1P3-201ENST00000459811 302 ntBASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 CLDND1-205ENST00000502288 560 ntTSL 4 BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 AC112204.1-201ENST00000502591 103 ntBASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 AC114786.4-201ENST00000508771 728 ntBASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 AC106872.4-201ENST00000510050 523 ntBASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 KRT18P54-201ENST00000513396 748 ntBASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 OR52H2P-201ENST00000514607 902 ntBASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 RN7SKP283-201ENST00000517197 270 ntBASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 AC091175.1-201ENST00000522168 572 ntBASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 MTND1P35-201ENST00000526739 508 ntBASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 KCTD21-AS1-204ENST00000528468 554 ntTSL 4 BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 AC013828.2-201ENST00000532487 235 ntBASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 MAL2-203ENST00000534619 578 ntTSL 4 BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 AP003034.1-201ENST00000534621 422 ntBASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 AC137056.1-202ENST00000575772 753 ntTSL 2 BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 RN7SL154P-201ENST00000578043 324 ntBASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 AC006120.1-201ENST00000579375 546 ntBASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 RN7SL664P-201ENST00000584239 305 ntBASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 AC006130.1-201ENST00000589365 555 ntTSL 4 BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 HIGD1B-205ENST00000591513 547 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 ZNF611-214ENST00000600943 560 ntTSL 4 BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 NRBF2P5-201ENST00000603087 788 ntBASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 OR1X1P-201ENST00000606159 931 ntBASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 AC097468.3-201ENST00000607956 456 ntBASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 AC016876.3-201ENST00000610459 426 ntBASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 MIR6751-201ENST00000610479 63 ntBASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 AC010542.5-201ENST00000612427 382 ntBASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 MIR6736-201ENST00000616799 59 ntBASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 AC106875.2-201ENST00000617634 596 ntTSL 2 BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 AL445264.1-201ENST00000621719 171 ntBASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 AC130448.2-201ENST00000624082 374 ntBASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 GOSR2-222ENST00000639031 885 ntTSL 3 BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 AP000356.4-201ENST00000639500 172 ntBASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 AL117339.4-201ENST00000608335 7063 ntBASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 ZFP42-203ENST00000618147 2338 ntAPPRIS P1 BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 CCDC191-201ENST00000295878 3976 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 LDHA-201ENST00000227157 1887 ntTSL 3 BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 CENPL-203ENST00000367710 1771 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 ZNF573-201ENST00000339503 2014 ntTSL 5 BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 FMO5-203ENST00000441068 1696 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 LDAH-209ENST00000440866 3728 ntTSL 2 BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 CDK1-203ENST00000395284 1913 ntAPPRIS P2 TSL 1 (best) BASIC7.25□□□□□ -1.25
DEPDC4Q8N2C3 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 83.9 ms