Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC018797.1-201ENST00000510791 255 ntBASIC5.36□□□□□ -1.55
NUDCD3Q8IVD9 RNA5SP438-201ENST00000516561 112 ntBASIC5.36□□□□□ -1.55
NUDCD3Q8IVD9 TMEM97P2-201ENST00000517841 403 ntBASIC5.36□□□□□ -1.55
NUDCD3Q8IVD9 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC5.36□□□□□ -1.55
NUDCD3Q8IVD9 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.36□□□□□ -1.55
NUDCD3Q8IVD9 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.36□□□□□ -1.55
NUDCD3Q8IVD9 AC023905.1-201ENST00000559799 1178 ntTSL 2 BASIC5.36□□□□□ -1.55
NUDCD3Q8IVD9 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.36□□□□□ -1.55
NUDCD3Q8IVD9 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.36□□□□□ -1.55
NUDCD3Q8IVD9 OR1E3-201ENST00000575608 948 ntBASIC5.36□□□□□ -1.55
NUDCD3Q8IVD9 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.36□□□□□ -1.55
NUDCD3Q8IVD9 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.36□□□□□ -1.55
NUDCD3Q8IVD9 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.36□□□□□ -1.55
NUDCD3Q8IVD9 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.36□□□□□ -1.55
NUDCD3Q8IVD9 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC5.36□□□□□ -1.55
NUDCD3Q8IVD9 AL451049.1-201ENST00000608672 497 ntBASIC5.36□□□□□ -1.55
NUDCD3Q8IVD9 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.36□□□□□ -1.55
NUDCD3Q8IVD9 IPO5-229ENST00000631030 192 ntTSL 5 BASIC5.36□□□□□ -1.55
NUDCD3Q8IVD9 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
NUDCD3Q8IVD9 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.36□□□□□ -1.55
NUDCD3Q8IVD9 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
NUDCD3Q8IVD9 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
NUDCD3Q8IVD9 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
NUDCD3Q8IVD9 AC114947.2-201ENST00000565748 2125 ntBASIC5.36□□□□□ -1.55
NUDCD3Q8IVD9 CTAGE5-201ENST00000280082 2554 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
NUDCD3Q8IVD9 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 LINC01355-201ENST00000566551 5444 ntBASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 LYARP1-201ENST00000436977 1501 ntBASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 RNA5SP273-201ENST00000362484 113 ntBASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 FAM183DP-201ENST00000421987 399 ntBASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 BX323845.3-201ENST00000428215 527 ntBASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 AC068228.1-201ENST00000461723 211 ntBASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 LINC02083-201ENST00000462835 515 ntTSL 3 BASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 AC021006.1-201ENST00000489849 553 ntBASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 RN7SL568P-201ENST00000493069 298 ntBASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 RPL15P21-201ENST00000495592 567 ntBASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 AC022360.1-201ENST00000521058 340 ntBASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 MRPS16P1-201ENST00000523462 412 ntBASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 AP000648.1-201ENST00000529682 397 ntBASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 HMGB1P42-201ENST00000532126 553 ntBASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 DCN-210ENST00000547568 823 ntTSL 3 BASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 AC006349.1-201ENST00000555526 235 ntBASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 AL031601.1-201ENST00000605702 394 ntBASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 AC244100.4-201ENST00000617747 388 ntBASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 AL596218.1-201ENST00000634239 1140 ntTSL 5 BASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 SAMMSON-227ENST00000642114 1199 ntBASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
NUDCD3Q8IVD9 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NUDCD3Q8IVD9 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
NUDCD3Q8IVD9 SMG1P7-201ENST00000565246 2704 ntBASIC5.34□□□□□ -1.55
NUDCD3Q8IVD9 AC011503.2-201ENST00000594230 1500 ntBASIC5.34□□□□□ -1.55
NUDCD3Q8IVD9 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.34□□□□□ -1.55
NUDCD3Q8IVD9 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.34□□□□□ -1.55
NUDCD3Q8IVD9 SSXP3-201ENST00000442971 1300 ntBASIC5.34□□□□□ -1.55
NUDCD3Q8IVD9 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NUDCD3Q8IVD9 OR9G4-201ENST00000302957 984 ntBASIC5.34□□□□□ -1.55
NUDCD3Q8IVD9 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NUDCD3Q8IVD9 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.34□□□□□ -1.55
NUDCD3Q8IVD9 RNA5SP232-201ENST00000364144 119 ntBASIC5.34□□□□□ -1.55
NUDCD3Q8IVD9 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.34□□□□□ -1.55
NUDCD3Q8IVD9 AC211486.3-201ENST00000412694 621 ntBASIC5.34□□□□□ -1.55
NUDCD3Q8IVD9 AC093827.1-201ENST00000480094 861 ntBASIC5.34□□□□□ -1.55
NUDCD3Q8IVD9 AC022133.1-201ENST00000490961 571 ntBASIC5.34□□□□□ -1.55
NUDCD3Q8IVD9 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC5.34□□□□□ -1.55
NUDCD3Q8IVD9 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.34□□□□□ -1.55
NUDCD3Q8IVD9 Y_RNA.667-201ENST00000516212 107 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 152 ms