Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
ATG4DQ86TL0 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
ATG4DQ86TL0 AP003175.1-201ENST00000641383 6658 ntBASIC6.35□□□□□ -1.39
ATG4DQ86TL0 ZNF639-201ENST00000326361 6064 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
ATG4DQ86TL0 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
ATG4DQ86TL0 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC6.35□□□□□ -1.39
ATG4DQ86TL0 AC092725.2-201ENST00000567658 1389 ntBASIC6.35□□□□□ -1.39
ATG4DQ86TL0 TTLL4-210ENST00000442769 3971 ntTSL 5 BASIC6.35□□□□□ -1.39
ATG4DQ86TL0 STARD4-AS1-201ENST00000500779 5525 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
ATG4DQ86TL0 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
ATG4DQ86TL0 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
ATG4DQ86TL0 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
ATG4DQ86TL0 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.35□□□□□ -1.39
ATG4DQ86TL0 TRIM55-203ENST00000350034 1177 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
ATG4DQ86TL0 RNA5SP429-201ENST00000363688 109 ntBASIC6.35□□□□□ -1.39
ATG4DQ86TL0 RN7SKP226-201ENST00000364912 300 ntBASIC6.35□□□□□ -1.39
ATG4DQ86TL0 SUGT1P2-201ENST00000379452 992 ntBASIC6.35□□□□□ -1.39
ATG4DQ86TL0 Y_RNA.453-201ENST00000384223 109 ntBASIC6.35□□□□□ -1.39
ATG4DQ86TL0 FAT1P1-201ENST00000406588 507 ntBASIC6.35□□□□□ -1.39
ATG4DQ86TL0 ZNF37CP-201ENST00000406795 241 ntBASIC6.35□□□□□ -1.39
ATG4DQ86TL0 RN7SKP271-201ENST00000410528 320 ntBASIC6.35□□□□□ -1.39
ATG4DQ86TL0 AL662791.3-201ENST00000413771 776 ntBASIC6.35□□□□□ -1.39
ATG4DQ86TL0 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC6.35□□□□□ -1.39
ATG4DQ86TL0 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC6.35□□□□□ -1.39
ATG4DQ86TL0 FABP5P1-201ENST00000423401 411 ntBASIC6.35□□□□□ -1.39
ATG4DQ86TL0 RPL21P43-201ENST00000425440 472 ntBASIC6.35□□□□□ -1.39
ATG4DQ86TL0 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC6.35□□□□□ -1.39
ATG4DQ86TL0 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC6.35□□□□□ -1.39
ATG4DQ86TL0 DPPA3P1-201ENST00000448050 469 ntBASIC6.35□□□□□ -1.39
ATG4DQ86TL0 CYCSP42-201ENST00000450823 238 ntBASIC6.35□□□□□ -1.39
ATG4DQ86TL0 SLAMF6P1-201ENST00000451067 602 ntBASIC6.35□□□□□ -1.39
ATG4DQ86TL0 AL354872.1-201ENST00000456361 967 ntBASIC6.35□□□□□ -1.39
ATG4DQ86TL0 GTF2IP12-201ENST00000456547 356 ntBASIC6.35□□□□□ -1.39
ATG4DQ86TL0 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
ATG4DQ86TL0 MTND6P6-201ENST00000478031 263 ntBASIC6.35□□□□□ -1.39
ATG4DQ86TL0 AL591122.1-201ENST00000487348 492 ntBASIC6.35□□□□□ -1.39
ATG4DQ86TL0 RPL10P7-201ENST00000495649 625 ntBASIC6.35□□□□□ -1.39
ATG4DQ86TL0 TECRP2-201ENST00000503270 928 ntBASIC6.35□□□□□ -1.39
ATG4DQ86TL0 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC6.35□□□□□ -1.39
ATG4DQ86TL0 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.35□□□□□ -1.39
ATG4DQ86TL0 AC106800.2-201ENST00000514009 1103 ntBASIC6.35□□□□□ -1.39
ATG4DQ86TL0 AC023632.1-201ENST00000518463 375 ntBASIC6.35□□□□□ -1.39
ATG4DQ86TL0 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC6.35□□□□□ -1.39
ATG4DQ86TL0 MTCO3P15-201ENST00000526563 574 ntBASIC6.35□□□□□ -1.39
ATG4DQ86TL0 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC6.35□□□□□ -1.39
ATG4DQ86TL0 AC019131.1-201ENST00000583654 622 ntTSL 5 BASIC6.35□□□□□ -1.39
ATG4DQ86TL0 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC6.35□□□□□ -1.39
ATG4DQ86TL0 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC6.35□□□□□ -1.39
ATG4DQ86TL0 DUXAP4-201ENST00000603046 613 ntBASIC6.35□□□□□ -1.39
ATG4DQ86TL0 COX6CP16-201ENST00000603667 216 ntBASIC6.35□□□□□ -1.39
ATG4DQ86TL0 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC6.35□□□□□ -1.39
ATG4DQ86TL0 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC6.35□□□□□ -1.39
ATG4DQ86TL0 RN7SL126P-201ENST00000616400 299 ntBASIC6.35□□□□□ -1.39
ATG4DQ86TL0 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
ATG4DQ86TL0 PPP3CB-AS1-215ENST00000620559 656 ntTSL 5 BASIC6.35□□□□□ -1.39
ATG4DQ86TL0 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC6.35□□□□□ -1.39
ATG4DQ86TL0 AC025048.6-202ENST00000627667 438 ntBASIC6.35□□□□□ -1.39
ATG4DQ86TL0 CGA-206ENST00000630630 832 ntTSL 2 BASIC6.35□□□□□ -1.39
ATG4DQ86TL0 AL356585.10-201ENST00000641883 123 ntBASIC6.35□□□□□ -1.39
ATG4DQ86TL0 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
ATG4DQ86TL0 SUPT7L-202ENST00000404798 4114 ntTSL 2 BASIC6.35□□□□□ -1.39
ATG4DQ86TL0 SFTPD-AS1-201ENST00000608229 5001 ntBASIC6.35□□□□□ -1.39
ATG4DQ86TL0 AL359922.3-201ENST00000624779 1670 ntBASIC6.35□□□□□ -1.39
ATG4DQ86TL0 PDE11A-203ENST00000409504 2102 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
ATG4DQ86TL0 METTL8-217ENST00000612742 8132 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
ATG4DQ86TL0 FAM227A-205ENST00000535113 10322 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
ATG4DQ86TL0 PDE4B-207ENST00000480109 2037 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
ATG4DQ86TL0 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.35□□□□□ -1.39
ATG4DQ86TL0 NPL-212ENST00000614468 2376 ntTSL 5 BASIC6.35□□□□□ -1.39
ATG4DQ86TL0 HMGCS2-204ENST00000544913 1925 ntTSL 2 BASIC6.35□□□□□ -1.39
ATG4DQ86TL0 AL359263.1-201ENST00000441188 2796 ntBASIC6.35□□□□□ -1.39
ATG4DQ86TL0 MAPK10-270ENST00000641102 3538 ntBASIC6.34□□□□□ -1.39
ATG4DQ86TL0 KCNJ1-205ENST00000392666 2621 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
ATG4DQ86TL0 CLNK-204ENST00000515667 4180 ntAPPRIS ALT2 TSL 3 BASIC6.34□□□□□ -1.39
ATG4DQ86TL0 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
ATG4DQ86TL0 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
ATG4DQ86TL0 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
ATG4DQ86TL0 CCDC158-201ENST00000388914 3663 ntAPPRIS P1 TSL 5 BASIC6.34□□□□□ -1.39
ATG4DQ86TL0 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
ATG4DQ86TL0 BLOC1S2-206ENST00000618916 2470 ntTSL 5 BASIC6.34□□□□□ -1.39
ATG4DQ86TL0 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
ATG4DQ86TL0 BDNF-207ENST00000395986 3979 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
ATG4DQ86TL0 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
ATG4DQ86TL0 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC6.34□□□□□ -1.39
ATG4DQ86TL0 AC129502.1-201ENST00000623261 1654 ntBASIC6.34□□□□□ -1.39
ATG4DQ86TL0 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
ATG4DQ86TL0 RN7SKP55-201ENST00000364888 307 ntBASIC6.34□□□□□ -1.39
ATG4DQ86TL0 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
ATG4DQ86TL0 CIR1P3-201ENST00000405137 479 ntBASIC6.34□□□□□ -1.39
ATG4DQ86TL0 OR2W4P-201ENST00000406496 926 ntBASIC6.34□□□□□ -1.39
ATG4DQ86TL0 RN7SKP137-201ENST00000411074 307 ntBASIC6.34□□□□□ -1.39
ATG4DQ86TL0 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC6.34□□□□□ -1.39
ATG4DQ86TL0 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC6.34□□□□□ -1.39
ATG4DQ86TL0 AC106870.2-201ENST00000421411 691 ntTSL 3 BASIC6.34□□□□□ -1.39
ATG4DQ86TL0 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC6.34□□□□□ -1.39
ATG4DQ86TL0 AC233728.2-201ENST00000425348 757 ntBASIC6.34□□□□□ -1.39
ATG4DQ86TL0 GAPDHP69-201ENST00000425504 1008 ntBASIC6.34□□□□□ -1.39
ATG4DQ86TL0 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC6.34□□□□□ -1.39
ATG4DQ86TL0 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC6.34□□□□□ -1.39
ATG4DQ86TL0 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 419.9 ms