Protein–RNA interactions for Protein: Q5SW96

LDLRAP1, Low density lipoprotein receptor adapter protein 1, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1Q5SW96 AC011933.2-201ENST00000578539 2790 ntBASIC5.55□□□□□ -1.52
LDLRAP1Q5SW96 AC008505.1-203ENST00000637345 1766 ntTSL 5 BASIC5.55□□□□□ -1.52
LDLRAP1Q5SW96 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.55□□□□□ -1.52
LDLRAP1Q5SW96 MT-RNR2-201ENST00000387347 1559 ntBASIC5.55□□□□□ -1.52
LDLRAP1Q5SW96 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LDLRAP1Q5SW96 C12orf50-201ENST00000298699 1722 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
LDLRAP1Q5SW96 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
LDLRAP1Q5SW96 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.54□□□□□ -1.52
LDLRAP1Q5SW96 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
LDLRAP1Q5SW96 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
LDLRAP1Q5SW96 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LDLRAP1Q5SW96 RN7SKP81-201ENST00000365603 331 ntBASIC5.54□□□□□ -1.52
LDLRAP1Q5SW96 MIR551A-201ENST00000385042 96 ntBASIC5.54□□□□□ -1.52
LDLRAP1Q5SW96 AC087752.1-201ENST00000391360 558 ntBASIC5.54□□□□□ -1.52
LDLRAP1Q5SW96 OR6E1P-201ENST00000414424 923 ntBASIC5.54□□□□□ -1.52
LDLRAP1Q5SW96 AL158827.1-201ENST00000416300 391 ntBASIC5.54□□□□□ -1.52
LDLRAP1Q5SW96 RAB9AP5-201ENST00000437794 597 ntBASIC5.54□□□□□ -1.52
LDLRAP1Q5SW96 RAB9AP2-201ENST00000443911 597 ntBASIC5.54□□□□□ -1.52
LDLRAP1Q5SW96 MED28P3-201ENST00000444288 531 ntBASIC5.54□□□□□ -1.52
LDLRAP1Q5SW96 AL450023.1-201ENST00000450868 751 ntBASIC5.54□□□□□ -1.52
LDLRAP1Q5SW96 AP000547.1-201ENST00000454360 617 ntBASIC5.54□□□□□ -1.52
LDLRAP1Q5SW96 AC104109.1-201ENST00000498563 436 ntBASIC5.54□□□□□ -1.52
LDLRAP1Q5SW96 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC5.54□□□□□ -1.52
LDLRAP1Q5SW96 GLUD1P3-202ENST00000508551 200 ntBASIC5.54□□□□□ -1.52
LDLRAP1Q5SW96 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
LDLRAP1Q5SW96 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC5.54□□□□□ -1.52
LDLRAP1Q5SW96 RFPL4AP3-201ENST00000515267 345 ntBASIC5.54□□□□□ -1.52
LDLRAP1Q5SW96 SNORA70.11-201ENST00000515987 138 ntBASIC5.54□□□□□ -1.52
LDLRAP1Q5SW96 SNORA70.13-201ENST00000516116 138 ntBASIC5.54□□□□□ -1.52
LDLRAP1Q5SW96 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.54□□□□□ -1.52
LDLRAP1Q5SW96 OR8Q1P-201ENST00000526467 655 ntBASIC5.54□□□□□ -1.52
LDLRAP1Q5SW96 AC009962.1-201ENST00000567327 3813 ntBASIC5.54□□□□□ -1.52
LDLRAP1Q5SW96 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC5.54□□□□□ -1.52
LDLRAP1Q5SW96 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.54□□□□□ -1.52
LDLRAP1Q5SW96 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.54□□□□□ -1.52
LDLRAP1Q5SW96 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LDLRAP1Q5SW96 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LDLRAP1Q5SW96 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC5.54□□□□□ -1.52
LDLRAP1Q5SW96 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.54□□□□□ -1.52
LDLRAP1Q5SW96 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
LDLRAP1Q5SW96 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
LDLRAP1Q5SW96 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LDLRAP1Q5SW96 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.54□□□□□ -1.52
LDLRAP1Q5SW96 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LDLRAP1Q5SW96 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 MIR323A-201ENST00000362199 86 ntBASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 RNA5SP326-201ENST00000363209 110 ntBASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 RNU4-2-201ENST00000365668 141 ntBASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 AC073909.1-201ENST00000447112 999 ntBASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 RN7SL717P-201ENST00000478343 297 ntBASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 RPS17P5-201ENST00000498293 408 ntBASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 RN7SKP253-201ENST00000516424 309 ntBASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 IGLVIV-64-201ENST00000518581 301 ntBASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 IGKV3D-34-201ENST00000522638 302 ntBASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 SNORA35B-201ENST00000607417 129 ntBASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 AC025574.2-201ENST00000615621 514 ntBASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 LGI1-202ENST00000371418 2381 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 AP001029.2-203ENST00000589795 4910 ntBASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
LDLRAP1Q5SW96 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
LDLRAP1Q5SW96 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.52□□□□□ -1.53
LDLRAP1Q5SW96 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LDLRAP1Q5SW96 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
LDLRAP1Q5SW96 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
LDLRAP1Q5SW96 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
LDLRAP1Q5SW96 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.52□□□□□ -1.53
LDLRAP1Q5SW96 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms