Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RFX7Q2KHR2 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RFX7Q2KHR2 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RFX7Q2KHR2 PPP2R2DP1-201ENST00000420526 637 ntBASIC6.55□□□□□ -1.36
RFX7Q2KHR2 PSMD10P3-201ENST00000437000 448 ntBASIC6.55□□□□□ -1.36
RFX7Q2KHR2 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC6.55□□□□□ -1.36
RFX7Q2KHR2 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
RFX7Q2KHR2 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC6.55□□□□□ -1.36
RFX7Q2KHR2 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC6.55□□□□□ -1.36
RFX7Q2KHR2 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC6.55□□□□□ -1.36
RFX7Q2KHR2 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
RFX7Q2KHR2 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.55□□□□□ -1.36
RFX7Q2KHR2 RPL10P14-201ENST00000565265 298 ntBASIC6.55□□□□□ -1.36
RFX7Q2KHR2 AP005403.1-201ENST00000579720 229 ntBASIC6.55□□□□□ -1.36
RFX7Q2KHR2 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC6.55□□□□□ -1.36
RFX7Q2KHR2 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC6.55□□□□□ -1.36
RFX7Q2KHR2 RNA5SP439-201ENST00000617595 124 ntBASIC6.55□□□□□ -1.36
RFX7Q2KHR2 AP001043.1-201ENST00000626259 773 ntTSL 5 BASIC6.55□□□□□ -1.36
RFX7Q2KHR2 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
RFX7Q2KHR2 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.55□□□□□ -1.36
RFX7Q2KHR2 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.54□□□□□ -1.36
RFX7Q2KHR2 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RFX7Q2KHR2 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RFX7Q2KHR2 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC6.54□□□□□ -1.36
RFX7Q2KHR2 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
RFX7Q2KHR2 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
RFX7Q2KHR2 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
RFX7Q2KHR2 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.54□□□□□ -1.36
RFX7Q2KHR2 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RFX7Q2KHR2 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RFX7Q2KHR2 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RFX7Q2KHR2 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.54□□□□□ -1.36
RFX7Q2KHR2 RPL7P58-201ENST00000402913 758 ntBASIC6.54□□□□□ -1.36
RFX7Q2KHR2 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
RFX7Q2KHR2 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RFX7Q2KHR2 AC079760.2-201ENST00000449361 681 ntTSL 5 BASIC6.54□□□□□ -1.36
RFX7Q2KHR2 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
RFX7Q2KHR2 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.54□□□□□ -1.36
RFX7Q2KHR2 OR10G5P-201ENST00000532733 358 ntBASIC6.54□□□□□ -1.36
RFX7Q2KHR2 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC6.54□□□□□ -1.36
RFX7Q2KHR2 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC6.54□□□□□ -1.36
RFX7Q2KHR2 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.54□□□□□ -1.36
RFX7Q2KHR2 AC106730.2-201ENST00000566641 540 ntBASIC6.54□□□□□ -1.36
RFX7Q2KHR2 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.54□□□□□ -1.36
RFX7Q2KHR2 WBP1LP8-201ENST00000617401 327 ntBASIC6.54□□□□□ -1.36
RFX7Q2KHR2 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RFX7Q2KHR2 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RFX7Q2KHR2 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
RFX7Q2KHR2 NAP1L1-204ENST00000535020 1686 ntTSL 2 BASIC6.54□□□□□ -1.36
RFX7Q2KHR2 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
RFX7Q2KHR2 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.53□□□□□ -1.36
RFX7Q2KHR2 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.53□□□□□ -1.36
RFX7Q2KHR2 AC015799.1-201ENST00000622996 3122 ntBASIC6.53□□□□□ -1.36
RFX7Q2KHR2 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
RFX7Q2KHR2 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RFX7Q2KHR2 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.53□□□□□ -1.36
RFX7Q2KHR2 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RFX7Q2KHR2 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC6.53□□□□□ -1.36
RFX7Q2KHR2 MAPK6PS2-201ENST00000379571 2060 ntBASIC6.53□□□□□ -1.36
RFX7Q2KHR2 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RFX7Q2KHR2 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RFX7Q2KHR2 GPS2P1-201ENST00000411761 986 ntBASIC6.53□□□□□ -1.36
RFX7Q2KHR2 AC006455.6-201ENST00000426192 893 ntBASIC6.53□□□□□ -1.36
RFX7Q2KHR2 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC6.53□□□□□ -1.36
RFX7Q2KHR2 HSPD1P12-201ENST00000429127 1069 ntBASIC6.53□□□□□ -1.36
RFX7Q2KHR2 AC124944.2-201ENST00000429866 1242 ntBASIC6.53□□□□□ -1.36
RFX7Q2KHR2 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC6.53□□□□□ -1.36
RFX7Q2KHR2 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.53□□□□□ -1.36
RFX7Q2KHR2 AC079168.1-201ENST00000458741 345 ntBASIC6.53□□□□□ -1.36
RFX7Q2KHR2 CBX1P5-201ENST00000475330 559 ntBASIC6.53□□□□□ -1.36
RFX7Q2KHR2 AC015864.1-201ENST00000496512 544 ntBASIC6.53□□□□□ -1.36
RFX7Q2KHR2 RPSAP51-201ENST00000497462 645 ntBASIC6.53□□□□□ -1.36
RFX7Q2KHR2 AC105420.1-201ENST00000504389 582 ntBASIC6.53□□□□□ -1.36
RFX7Q2KHR2 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC6.53□□□□□ -1.36
RFX7Q2KHR2 SCARNA16.4-201ENST00000516956 187 ntBASIC6.53□□□□□ -1.36
RFX7Q2KHR2 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC6.53□□□□□ -1.36
RFX7Q2KHR2 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.53□□□□□ -1.36
RFX7Q2KHR2 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.53□□□□□ -1.36
RFX7Q2KHR2 AC005341.1-201ENST00000571086 708 ntBASIC6.53□□□□□ -1.36
RFX7Q2KHR2 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
RFX7Q2KHR2 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RFX7Q2KHR2 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.53□□□□□ -1.36
RFX7Q2KHR2 SAMM50P1-201ENST00000455403 1399 ntBASIC6.53□□□□□ -1.36
RFX7Q2KHR2 AC144833.1-201ENST00000567953 4089 ntBASIC6.52□□□□□ -1.36
RFX7Q2KHR2 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC6.52□□□□□ -1.37
RFX7Q2KHR2 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RFX7Q2KHR2 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RFX7Q2KHR2 OR2H1-201ENST00000377132 2253 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
RFX7Q2KHR2 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RFX7Q2KHR2 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.52□□□□□ -1.37
RFX7Q2KHR2 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
RFX7Q2KHR2 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
RFX7Q2KHR2 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC6.52□□□□□ -1.37
RFX7Q2KHR2 RNU1-146P-201ENST00000364015 165 ntBASIC6.52□□□□□ -1.37
RFX7Q2KHR2 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC6.52□□□□□ -1.37
RFX7Q2KHR2 MIR765-201ENST00000390226 114 ntBASIC6.52□□□□□ -1.37
RFX7Q2KHR2 SNORA48.4-201ENST00000391089 134 ntBASIC6.52□□□□□ -1.37
RFX7Q2KHR2 AL109941.1-201ENST00000401925 229 ntBASIC6.52□□□□□ -1.37
RFX7Q2KHR2 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC6.52□□□□□ -1.37
RFX7Q2KHR2 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms