Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC5.58□□□□□ -1.52
RAE1P78406 AC084824.2-201ENST00000548906 345 ntBASIC5.58□□□□□ -1.52
RAE1P78406 AC091078.2-201ENST00000557145 559 ntBASIC5.58□□□□□ -1.52
RAE1P78406 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.58□□□□□ -1.52
RAE1P78406 AP000919.1-202ENST00000581139 1264 ntBASIC5.58□□□□□ -1.52
RAE1P78406 AC005244.1-201ENST00000582566 339 ntBASIC5.58□□□□□ -1.52
RAE1P78406 AC060780.2-201ENST00000589047 198 ntBASIC5.58□□□□□ -1.52
RAE1P78406 AP002802.2-201ENST00000605877 235 ntBASIC5.58□□□□□ -1.52
RAE1P78406 TEX41-293ENST00000630451 690 ntTSL 5 BASIC5.58□□□□□ -1.52
RAE1P78406 AC000095.2-202ENST00000637415 154 ntBASIC5.58□□□□□ -1.52
RAE1P78406 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.58□□□□□ -1.52
RAE1P78406 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RAE1P78406 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
RAE1P78406 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RAE1P78406 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
RAE1P78406 AC079298.1-201ENST00000625026 1619 ntBASIC5.58□□□□□ -1.52
RAE1P78406 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
RAE1P78406 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
RAE1P78406 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.58□□□□□ -1.52
RAE1P78406 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RAE1P78406 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RAE1P78406 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.58□□□□□ -1.52
RAE1P78406 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RAE1P78406 MFSD8-219ENST00000641228 2559 ntBASIC5.58□□□□□ -1.52
RAE1P78406 KARSP1-201ENST00000451871 1752 ntBASIC5.57□□□□□ -1.52
RAE1P78406 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.57□□□□□ -1.52
RAE1P78406 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
RAE1P78406 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.57□□□□□ -1.52
RAE1P78406 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RAE1P78406 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.57□□□□□ -1.52
RAE1P78406 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RAE1P78406 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RAE1P78406 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.57□□□□□ -1.52
RAE1P78406 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.57□□□□□ -1.52
RAE1P78406 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RAE1P78406 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
RAE1P78406 RNU6-207P-201ENST00000384137 107 ntBASIC5.57□□□□□ -1.52
RAE1P78406 RNU6-481P-201ENST00000384194 107 ntBASIC5.57□□□□□ -1.52
RAE1P78406 HMGB1P10-201ENST00000395823 563 ntBASIC5.57□□□□□ -1.52
RAE1P78406 ZNF602P-201ENST00000405929 924 ntBASIC5.57□□□□□ -1.52
RAE1P78406 RNU2-17P-201ENST00000410290 190 ntBASIC5.57□□□□□ -1.52
RAE1P78406 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC5.57□□□□□ -1.52
RAE1P78406 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.57□□□□□ -1.52
RAE1P78406 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC5.57□□□□□ -1.52
RAE1P78406 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC5.57□□□□□ -1.52
RAE1P78406 AC015983.1-201ENST00000441577 373 ntBASIC5.57□□□□□ -1.52
RAE1P78406 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.57□□□□□ -1.52
RAE1P78406 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC5.57□□□□□ -1.52
RAE1P78406 MTND2P8-201ENST00000450555 1025 ntBASIC5.57□□□□□ -1.52
RAE1P78406 AC020779.1-201ENST00000478757 796 ntBASIC5.57□□□□□ -1.52
RAE1P78406 PDCL3P4-201ENST00000489621 720 ntBASIC5.57□□□□□ -1.52
RAE1P78406 RPS26P24-201ENST00000497656 331 ntBASIC5.57□□□□□ -1.52
RAE1P78406 AC090058.1-201ENST00000498788 435 ntBASIC5.57□□□□□ -1.52
RAE1P78406 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RAE1P78406 AC097103.2-204ENST00000510068 569 ntTSL 3 BASIC5.57□□□□□ -1.52
RAE1P78406 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.57□□□□□ -1.52
RAE1P78406 RNA5SP340-201ENST00000517132 107 ntBASIC5.57□□□□□ -1.52
RAE1P78406 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.57□□□□□ -1.52
RAE1P78406 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC5.57□□□□□ -1.52
RAE1P78406 EEF1A1P37-201ENST00000522748 715 ntBASIC5.57□□□□□ -1.52
RAE1P78406 AP000916.1-201ENST00000533869 835 ntBASIC5.57□□□□□ -1.52
RAE1P78406 AP001804.2-201ENST00000533932 910 ntBASIC5.57□□□□□ -1.52
RAE1P78406 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.57□□□□□ -1.52
RAE1P78406 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.57□□□□□ -1.52
RAE1P78406 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.57□□□□□ -1.52
RAE1P78406 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.57□□□□□ -1.52
RAE1P78406 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.57□□□□□ -1.52
RAE1P78406 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.57□□□□□ -1.52
RAE1P78406 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.57□□□□□ -1.52
RAE1P78406 AC106734.1-201ENST00000568646 663 ntBASIC5.57□□□□□ -1.52
RAE1P78406 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.57□□□□□ -1.52
RAE1P78406 AL163952.1-202ENST00000569625 600 ntBASIC5.57□□□□□ -1.52
RAE1P78406 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.57□□□□□ -1.52
RAE1P78406 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC5.57□□□□□ -1.52
RAE1P78406 AP001160.4-201ENST00000596971 382 ntBASIC5.57□□□□□ -1.52
RAE1P78406 AL513327.3-201ENST00000602618 469 ntBASIC5.57□□□□□ -1.52
RAE1P78406 AC098935.2-201ENST00000604222 466 ntBASIC5.57□□□□□ -1.52
RAE1P78406 AC067838.1-201ENST00000606064 577 ntBASIC5.57□□□□□ -1.52
RAE1P78406 AC108673.3-201ENST00000609183 335 ntBASIC5.57□□□□□ -1.52
RAE1P78406 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC5.57□□□□□ -1.52
RAE1P78406 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.57□□□□□ -1.52
RAE1P78406 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.57□□□□□ -1.52
RAE1P78406 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RAE1P78406 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.57□□□□□ -1.52
RAE1P78406 AC022400.9-201ENST00000623633 273 ntBASIC5.57□□□□□ -1.52
RAE1P78406 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.57□□□□□ -1.52
RAE1P78406 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.57□□□□□ -1.52
RAE1P78406 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RAE1P78406 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
RAE1P78406 AC011933.2-201ENST00000578539 2790 ntBASIC5.57□□□□□ -1.52
RAE1P78406 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
RAE1P78406 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
RAE1P78406 AC104966.1-201ENST00000467010 1464 ntBASIC5.57□□□□□ -1.52
RAE1P78406 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RAE1P78406 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RAE1P78406 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
RAE1P78406 BX284613.1-201ENST00000452221 1641 ntBASIC5.56□□□□□ -1.52
RAE1P78406 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC5.56□□□□□ -1.52
RAE1P78406 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
RAE1P78406 AF287957.1-201ENST00000607368 1595 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 84.6 ms