Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC4.62□□□□□ -1.67
LMO4P61968 Metazoa_SRP.55-201ENST00000618452 275 ntBASIC4.62□□□□□ -1.67
LMO4P61968 AC109809.1-201ENST00000619665 545 ntBASIC4.62□□□□□ -1.67
LMO4P61968 AC018445.2-201ENST00000622987 260 ntBASIC4.62□□□□□ -1.67
LMO4P61968 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC4.62□□□□□ -1.67
LMO4P61968 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LMO4P61968 CNTN3-201ENST00000263665 4948 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
LMO4P61968 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC4.62□□□□□ -1.67
LMO4P61968 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC4.62□□□□□ -1.67
LMO4P61968 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
LMO4P61968 DDX18P6-201ENST00000450119 1997 ntBASIC4.62□□□□□ -1.67
LMO4P61968 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.62□□□□□ -1.67
LMO4P61968 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC4.62□□□□□ -1.67
LMO4P61968 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
LMO4P61968 ZNF780A-204ENST00000455521 3600 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
LMO4P61968 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LMO4P61968 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
LMO4P61968 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
LMO4P61968 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LMO4P61968 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
LMO4P61968 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC4.61□□□□□ -1.67
LMO4P61968 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LMO4P61968 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC4.61□□□□□ -1.67
LMO4P61968 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
LMO4P61968 RNU1-19P-201ENST00000363306 165 ntBASIC4.61□□□□□ -1.67
LMO4P61968 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
LMO4P61968 RNU1-77P-201ENST00000390868 162 ntBASIC4.61□□□□□ -1.67
LMO4P61968 FIGN-202ENST00000409634 746 ntTSL 5 BASIC4.61□□□□□ -1.67
LMO4P61968 AL390774.1-201ENST00000411924 246 ntBASIC4.61□□□□□ -1.67
LMO4P61968 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC4.61□□□□□ -1.67
LMO4P61968 RNF10P1-201ENST00000418589 369 ntBASIC4.61□□□□□ -1.67
LMO4P61968 SETP9-201ENST00000423837 832 ntBASIC4.61□□□□□ -1.67
LMO4P61968 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC4.61□□□□□ -1.67
LMO4P61968 MKLN1-204ENST00000429546 572 ntTSL 4 BASIC4.61□□□□□ -1.67
LMO4P61968 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC4.61□□□□□ -1.67
LMO4P61968 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC4.61□□□□□ -1.67
LMO4P61968 USP24P1-201ENST00000433802 779 ntBASIC4.61□□□□□ -1.67
LMO4P61968 CYCSP6-201ENST00000434498 302 ntBASIC4.61□□□□□ -1.67
LMO4P61968 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LMO4P61968 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.61□□□□□ -1.67
LMO4P61968 AL596266.1-201ENST00000448132 400 ntBASIC4.61□□□□□ -1.67
LMO4P61968 RPS26P41-201ENST00000450370 284 ntBASIC4.61□□□□□ -1.67
LMO4P61968 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC4.61□□□□□ -1.67
LMO4P61968 MTND6P32-201ENST00000457611 483 ntBASIC4.61□□□□□ -1.67
LMO4P61968 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC4.61□□□□□ -1.67
LMO4P61968 RPL5P12-201ENST00000477071 851 ntBASIC4.61□□□□□ -1.67
LMO4P61968 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC4.61□□□□□ -1.67
LMO4P61968 RPS21P4-201ENST00000487122 248 ntBASIC4.61□□□□□ -1.67
LMO4P61968 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC4.61□□□□□ -1.67
LMO4P61968 AC006499.3-201ENST00000506077 748 ntBASIC4.61□□□□□ -1.67
LMO4P61968 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
LMO4P61968 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.61□□□□□ -1.67
LMO4P61968 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.61□□□□□ -1.67
LMO4P61968 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC4.61□□□□□ -1.67
LMO4P61968 NPM1P52-201ENST00000518264 846 ntBASIC4.61□□□□□ -1.67
LMO4P61968 CDC42P3-201ENST00000518493 633 ntBASIC4.61□□□□□ -1.67
LMO4P61968 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.61□□□□□ -1.67
LMO4P61968 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC4.61□□□□□ -1.67
LMO4P61968 AC126177.5-201ENST00000549599 178 ntBASIC4.61□□□□□ -1.67
LMO4P61968 AL049779.2-201ENST00000553847 315 ntBASIC4.61□□□□□ -1.67
LMO4P61968 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.61□□□□□ -1.67
LMO4P61968 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC4.61□□□□□ -1.67
LMO4P61968 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC4.61□□□□□ -1.67
LMO4P61968 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC4.61□□□□□ -1.67
LMO4P61968 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC4.61□□□□□ -1.67
LMO4P61968 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC4.61□□□□□ -1.67
LMO4P61968 PRELID3BP3-201ENST00000584963 545 ntBASIC4.61□□□□□ -1.67
LMO4P61968 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.61□□□□□ -1.67
LMO4P61968 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC4.61□□□□□ -1.67
LMO4P61968 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC4.61□□□□□ -1.67
LMO4P61968 UGP2-232ENST00000640075 567 ntTSL 5 BASIC4.61□□□□□ -1.67
LMO4P61968 AC109780.1-201ENST00000451768 1344 ntBASIC4.61□□□□□ -1.67
LMO4P61968 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LMO4P61968 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC4.61□□□□□ -1.67
LMO4P61968 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LMO4P61968 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC4.61□□□□□ -1.67
LMO4P61968 AC005261.6-201ENST00000623072 1387 ntBASIC4.61□□□□□ -1.67
LMO4P61968 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LMO4P61968 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
LMO4P61968 AC092111.2-201ENST00000611627 1414 ntBASIC4.61□□□□□ -1.67
LMO4P61968 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC4.61□□□□□ -1.67
LMO4P61968 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC4.61□□□□□ -1.67
LMO4P61968 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LMO4P61968 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
LMO4P61968 ATP5A1P4-201ENST00000556888 1605 ntBASIC4.61□□□□□ -1.67
LMO4P61968 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC4.61□□□□□ -1.67
LMO4P61968 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
LMO4P61968 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC4.6□□□□□ -1.67
LMO4P61968 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC4.6□□□□□ -1.67
LMO4P61968 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.6□□□□□ -1.67
LMO4P61968 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LMO4P61968 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
LMO4P61968 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LMO4P61968 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC4.6□□□□□ -1.67
LMO4P61968 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
LMO4P61968 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
LMO4P61968 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
LMO4P61968 RNA5SP335-201ENST00000363817 110 ntBASIC4.6□□□□□ -1.67
LMO4P61968 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
LMO4P61968 MIR223-201ENST00000385204 110 ntBASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 161.2 ms