Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
LIM2P55344 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
LIM2P55344 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
LIM2P55344 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.14□□□□□ -1.59
LIM2P55344 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LIM2P55344 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.14□□□□□ -1.59
LIM2P55344 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC5.14□□□□□ -1.59
LIM2P55344 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LIM2P55344 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.14□□□□□ -1.59
LIM2P55344 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
LIM2P55344 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LIM2P55344 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LIM2P55344 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
LIM2P55344 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LIM2P55344 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.14□□□□□ -1.59
LIM2P55344 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
LIM2P55344 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.14□□□□□ -1.59
LIM2P55344 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LIM2P55344 PPIAP9-201ENST00000403866 498 ntBASIC5.14□□□□□ -1.59
LIM2P55344 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.14□□□□□ -1.59
LIM2P55344 RN7SKP206-201ENST00000410823 293 ntBASIC5.14□□□□□ -1.59
LIM2P55344 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC5.14□□□□□ -1.59
LIM2P55344 SRSF1P1-201ENST00000424058 520 ntBASIC5.14□□□□□ -1.59
LIM2P55344 NAP1L4P2-201ENST00000425958 899 ntBASIC5.14□□□□□ -1.59
LIM2P55344 AL121776.1-201ENST00000429337 372 ntBASIC5.14□□□□□ -1.59
LIM2P55344 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.14□□□□□ -1.59
LIM2P55344 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.14□□□□□ -1.59
LIM2P55344 RPL12P17-201ENST00000432393 498 ntBASIC5.14□□□□□ -1.59
LIM2P55344 REG1CP-206ENST00000447469 496 ntBASIC5.14□□□□□ -1.59
LIM2P55344 AL672138.1-201ENST00000450604 1015 ntBASIC5.14□□□□□ -1.59
LIM2P55344 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5.14□□□□□ -1.59
LIM2P55344 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
LIM2P55344 RN7SL184P-201ENST00000488308 297 ntBASIC5.14□□□□□ -1.59
LIM2P55344 RN7SL547P-201ENST00000490793 290 ntBASIC5.14□□□□□ -1.59
LIM2P55344 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LIM2P55344 HMGB1P44-201ENST00000508597 572 ntBASIC5.14□□□□□ -1.59
LIM2P55344 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC5.14□□□□□ -1.59
LIM2P55344 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC5.14□□□□□ -1.59
LIM2P55344 RNU6-1334P-201ENST00000516032 105 ntBASIC5.14□□□□□ -1.59
LIM2P55344 SCARNA16.4-201ENST00000516956 187 ntBASIC5.14□□□□□ -1.59
LIM2P55344 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.14□□□□□ -1.59
LIM2P55344 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.14□□□□□ -1.59
LIM2P55344 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.14□□□□□ -1.59
LIM2P55344 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.14□□□□□ -1.59
LIM2P55344 OR11H3P-201ENST00000554547 982 ntBASIC5.14□□□□□ -1.59
LIM2P55344 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LIM2P55344 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.14□□□□□ -1.59
LIM2P55344 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC5.14□□□□□ -1.59
LIM2P55344 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC5.14□□□□□ -1.59
LIM2P55344 AP005901.4-201ENST00000577336 569 ntBASIC5.14□□□□□ -1.59
LIM2P55344 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LIM2P55344 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
LIM2P55344 AC135068.5-201ENST00000624197 983 ntBASIC5.14□□□□□ -1.59
LIM2P55344 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LIM2P55344 AL049767.1-202ENST00000637826 242 ntBASIC5.14□□□□□ -1.59
LIM2P55344 AC138627.1-204ENST00000641894 765 ntBASIC5.14□□□□□ -1.59
LIM2P55344 TRAT1-201ENST00000295756 1919 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
LIM2P55344 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.14□□□□□ -1.59
LIM2P55344 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LIM2P55344 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.14□□□□□ -1.59
LIM2P55344 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
LIM2P55344 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
LIM2P55344 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
LIM2P55344 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LIM2P55344 AC100757.1-201ENST00000616872 1835 ntBASIC5.13□□□□□ -1.59
LIM2P55344 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LIM2P55344 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
LIM2P55344 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
LIM2P55344 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.13□□□□□ -1.59
LIM2P55344 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
LIM2P55344 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
LIM2P55344 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
LIM2P55344 RNA5SP132-201ENST00000364725 118 ntBASIC5.13□□□□□ -1.59
LIM2P55344 PRUNEP1-201ENST00000425846 705 ntBASIC5.13□□□□□ -1.59
LIM2P55344 VTI1BP4-201ENST00000427516 527 ntBASIC5.13□□□□□ -1.59
LIM2P55344 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.13□□□□□ -1.59
LIM2P55344 GSTM5P1-201ENST00000434751 660 ntBASIC5.13□□□□□ -1.59
LIM2P55344 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC5.13□□□□□ -1.59
LIM2P55344 NPM1P48-201ENST00000436002 853 ntBASIC5.13□□□□□ -1.59
LIM2P55344 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.13□□□□□ -1.59
LIM2P55344 RNU7-157P-201ENST00000459600 66 ntBASIC5.13□□□□□ -1.59
LIM2P55344 AC115223.1-201ENST00000466377 870 ntBASIC5.13□□□□□ -1.59
LIM2P55344 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.13□□□□□ -1.59
LIM2P55344 MTCO3P42-201ENST00000509488 518 ntBASIC5.13□□□□□ -1.59
LIM2P55344 AC106872.4-201ENST00000510050 523 ntBASIC5.13□□□□□ -1.59
LIM2P55344 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.13□□□□□ -1.59
LIM2P55344 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC5.13□□□□□ -1.59
LIM2P55344 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.13□□□□□ -1.59
LIM2P55344 MTCO3P39-201ENST00000514812 518 ntBASIC5.13□□□□□ -1.59
LIM2P55344 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.13□□□□□ -1.59
LIM2P55344 OR8G3P-201ENST00000533406 921 ntBASIC5.13□□□□□ -1.59
LIM2P55344 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.13□□□□□ -1.59
LIM2P55344 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.13□□□□□ -1.59
LIM2P55344 BLZF2P-201ENST00000553776 1130 ntBASIC5.13□□□□□ -1.59
LIM2P55344 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC5.13□□□□□ -1.59
LIM2P55344 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.13□□□□□ -1.59
LIM2P55344 MIR7853-201ENST00000584820 132 ntBASIC5.13□□□□□ -1.59
LIM2P55344 AC060766.1-201ENST00000590824 627 ntBASIC5.13□□□□□ -1.59
LIM2P55344 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.13□□□□□ -1.59
LIM2P55344 SUGT1P3-202ENST00000604259 383 ntBASIC5.13□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms