Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC002310.3-201ENST00000569728 723 ntBASIC5.49□□□□□ -1.53
CDH13P55290 AC019322.1-201ENST00000571869 389 ntBASIC5.49□□□□□ -1.53
CDH13P55290 NRXN1-223ENST00000625891 1164 ntTSL 4 BASIC5.49□□□□□ -1.53
CDH13P55290 AC091948.2-201ENST00000636510 279 ntBASIC5.49□□□□□ -1.53
CDH13P55290 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CDH13P55290 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.49□□□□□ -1.53
CDH13P55290 DTNA-227ENST00000597599 1869 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
CDH13P55290 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC5.49□□□□□ -1.53
CDH13P55290 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.49□□□□□ -1.53
CDH13P55290 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CDH13P55290 AC004158.1-201ENST00000564508 4319 ntBASIC5.49□□□□□ -1.53
CDH13P55290 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.49□□□□□ -1.53
CDH13P55290 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC5.49□□□□□ -1.53
CDH13P55290 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CDH13P55290 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.48□□□□□ -1.53
CDH13P55290 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CDH13P55290 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDH13P55290 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDH13P55290 AL022311.1-201ENST00000623726 19416 ntBASIC5.48□□□□□ -1.53
CDH13P55290 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CDH13P55290 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDH13P55290 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.48□□□□□ -1.53
CDH13P55290 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDH13P55290 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDH13P55290 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.48□□□□□ -1.53
CDH13P55290 RNU1-65P-201ENST00000363919 148 ntBASIC5.48□□□□□ -1.53
CDH13P55290 RNU6-1251P-201ENST00000364502 107 ntBASIC5.48□□□□□ -1.53
CDH13P55290 RN7SKP81-201ENST00000365603 331 ntBASIC5.48□□□□□ -1.53
CDH13P55290 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDH13P55290 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CDH13P55290 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.48□□□□□ -1.53
CDH13P55290 REREP1Y-201ENST00000422655 198 ntBASIC5.48□□□□□ -1.53
CDH13P55290 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.48□□□□□ -1.53
CDH13P55290 REREP2Y-201ENST00000439103 200 ntBASIC5.48□□□□□ -1.53
CDH13P55290 RPL5P25-201ENST00000441148 775 ntBASIC5.48□□□□□ -1.53
CDH13P55290 AC007655.1-201ENST00000444324 357 ntTSL 3 BASIC5.48□□□□□ -1.53
CDH13P55290 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CDH13P55290 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC5.48□□□□□ -1.53
CDH13P55290 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.48□□□□□ -1.53
CDH13P55290 AC118758.1-202ENST00000454719 225 ntBASIC5.48□□□□□ -1.53
CDH13P55290 NXT1P1-201ENST00000458481 316 ntBASIC5.48□□□□□ -1.53
CDH13P55290 AL117692.1-201ENST00000494283 713 ntBASIC5.48□□□□□ -1.53
CDH13P55290 RPSAP51-201ENST00000497462 645 ntBASIC5.48□□□□□ -1.53
CDH13P55290 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC5.48□□□□□ -1.53
CDH13P55290 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.48□□□□□ -1.53
CDH13P55290 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CDH13P55290 AC108157.1-201ENST00000510511 539 ntBASIC5.48□□□□□ -1.53
CDH13P55290 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.48□□□□□ -1.53
CDH13P55290 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC5.48□□□□□ -1.53
CDH13P55290 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.48□□□□□ -1.53
CDH13P55290 DUX4L52-201ENST00000549363 777 ntBASIC5.48□□□□□ -1.53
CDH13P55290 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.48□□□□□ -1.53
CDH13P55290 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC5.48□□□□□ -1.53
CDH13P55290 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CDH13P55290 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.48□□□□□ -1.53
CDH13P55290 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC5.48□□□□□ -1.53
CDH13P55290 AC016839.1-201ENST00000578162 867 ntBASIC5.48□□□□□ -1.53
CDH13P55290 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC5.48□□□□□ -1.53
CDH13P55290 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDH13P55290 AC063977.5-201ENST00000601044 974 ntBASIC5.48□□□□□ -1.53
CDH13P55290 AC002069.2-201ENST00000603580 883 ntBASIC5.48□□□□□ -1.53
CDH13P55290 AL133370.2-201ENST00000619934 439 ntBASIC5.48□□□□□ -1.53
CDH13P55290 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.48□□□□□ -1.53
CDH13P55290 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.48□□□□□ -1.53
CDH13P55290 AP001052.1-201ENST00000626421 99 ntBASIC5.48□□□□□ -1.53
CDH13P55290 HPVC1-201ENST00000629899 1198 ntBASIC5.48□□□□□ -1.53
CDH13P55290 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.48□□□□□ -1.53
CDH13P55290 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDH13P55290 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CDH13P55290 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CDH13P55290 AC010266.2-201ENST00000564741 3255 ntBASIC5.48□□□□□ -1.53
CDH13P55290 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
CDH13P55290 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
CDH13P55290 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CDH13P55290 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CDH13P55290 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH13P55290 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH13P55290 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
CDH13P55290 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
CDH13P55290 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH13P55290 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CDH13P55290 AC010132.2-201ENST00000295493 1043 ntBASIC5.47□□□□□ -1.53
CDH13P55290 GAPDHP24-201ENST00000328713 983 ntBASIC5.47□□□□□ -1.53
CDH13P55290 RNU1-150P-201ENST00000362491 162 ntBASIC5.47□□□□□ -1.53
CDH13P55290 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
CDH13P55290 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
CDH13P55290 MIR1203-201ENST00000408812 85 ntBASIC5.47□□□□□ -1.53
CDH13P55290 RPSAP35-201ENST00000413753 818 ntBASIC5.47□□□□□ -1.53
CDH13P55290 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC5.47□□□□□ -1.53
CDH13P55290 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.47□□□□□ -1.53
CDH13P55290 NENFP1-201ENST00000419476 466 ntBASIC5.47□□□□□ -1.53
CDH13P55290 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.47□□□□□ -1.53
CDH13P55290 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC5.47□□□□□ -1.53
CDH13P55290 NDUFB4P8-201ENST00000435351 367 ntBASIC5.47□□□□□ -1.53
CDH13P55290 Z99127.2-201ENST00000441426 334 ntBASIC5.47□□□□□ -1.53
CDH13P55290 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC5.47□□□□□ -1.53
CDH13P55290 EIF2S2P4-201ENST00000461070 984 ntBASIC5.47□□□□□ -1.53
CDH13P55290 RPS17P15-201ENST00000475609 349 ntBASIC5.47□□□□□ -1.53
CDH13P55290 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.47□□□□□ -1.53
CDH13P55290 SNORA70.11-201ENST00000515987 138 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms