Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 MIR4310-201ENST00000582950 57 ntBASIC5.65□□□□□ -1.5
CDH6P55285 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.65□□□□□ -1.5
CDH6P55285 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.65□□□□□ -1.5
CDH6P55285 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.65□□□□□ -1.5
CDH6P55285 RNA5SP440-201ENST00000612665 119 ntBASIC5.65□□□□□ -1.5
CDH6P55285 RN7SL787P-201ENST00000613000 284 ntBASIC5.65□□□□□ -1.5
CDH6P55285 AC126175.1-201ENST00000617041 758 ntBASIC5.65□□□□□ -1.5
CDH6P55285 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.65□□□□□ -1.5
CDH6P55285 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CDH6P55285 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
CDH6P55285 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CDH6P55285 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC5.65□□□□□ -1.51
CDH6P55285 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CDH6P55285 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.65□□□□□ -1.51
CDH6P55285 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
CDH6P55285 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.65□□□□□ -1.51
CDH6P55285 AP001029.2-203ENST00000589795 4910 ntBASIC5.64□□□□□ -1.51
CDH6P55285 AL138820.1-201ENST00000617901 5305 ntBASIC5.64□□□□□ -1.51
CDH6P55285 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.64□□□□□ -1.51
CDH6P55285 AC093671.1-201ENST00000624981 2929 ntBASIC5.64□□□□□ -1.51
CDH6P55285 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDH6P55285 SNORA17A-201ENST00000391185 133 ntBASIC5.64□□□□□ -1.51
CDH6P55285 AL050305.1-201ENST00000399993 1230 ntBASIC5.64□□□□□ -1.51
CDH6P55285 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.64□□□□□ -1.51
CDH6P55285 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.64□□□□□ -1.51
CDH6P55285 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDH6P55285 YWHAEP1-201ENST00000453697 763 ntBASIC5.64□□□□□ -1.51
CDH6P55285 AC135999.1-201ENST00000478962 479 ntBASIC5.64□□□□□ -1.51
CDH6P55285 RN7SL273P-201ENST00000481561 299 ntBASIC5.64□□□□□ -1.51
CDH6P55285 AC021193.1-201ENST00000511607 420 ntBASIC5.64□□□□□ -1.51
CDH6P55285 OR4A43P-201ENST00000532938 908 ntBASIC5.64□□□□□ -1.51
CDH6P55285 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.64□□□□□ -1.51
CDH6P55285 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.64□□□□□ -1.51
CDH6P55285 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.64□□□□□ -1.51
CDH6P55285 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.64□□□□□ -1.51
CDH6P55285 FO393422.1-201ENST00000603908 708 ntBASIC5.64□□□□□ -1.51
CDH6P55285 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDH6P55285 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.64□□□□□ -1.51
CDH6P55285 AL691477.1-201ENST00000624398 162 ntBASIC5.64□□□□□ -1.51
CDH6P55285 SNORA17.5-201ENST00000630429 132 ntBASIC5.64□□□□□ -1.51
CDH6P55285 AC103703.1-201ENST00000634783 663 ntBASIC5.64□□□□□ -1.51
CDH6P55285 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDH6P55285 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
CDH6P55285 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
CDH6P55285 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.64□□□□□ -1.51
CDH6P55285 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.63□□□□□ -1.51
CDH6P55285 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.63□□□□□ -1.51
CDH6P55285 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.63□□□□□ -1.51
CDH6P55285 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.63□□□□□ -1.51
CDH6P55285 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDH6P55285 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDH6P55285 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CDH6P55285 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CDH6P55285 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.63□□□□□ -1.51
CDH6P55285 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
CDH6P55285 RN7SKP293-201ENST00000411389 296 ntBASIC5.63□□□□□ -1.51
CDH6P55285 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.63□□□□□ -1.51
CDH6P55285 Z93019.1-201ENST00000416450 973 ntBASIC5.63□□□□□ -1.51
CDH6P55285 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDH6P55285 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.63□□□□□ -1.51
CDH6P55285 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.63□□□□□ -1.51
CDH6P55285 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDH6P55285 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CDH6P55285 AC073909.1-201ENST00000447112 999 ntBASIC5.63□□□□□ -1.51
CDH6P55285 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC5.63□□□□□ -1.51
CDH6P55285 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.63□□□□□ -1.51
CDH6P55285 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
CDH6P55285 AC092754.1-201ENST00000472975 479 ntBASIC5.63□□□□□ -1.51
CDH6P55285 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.63□□□□□ -1.51
CDH6P55285 UGT2A3P7-201ENST00000510485 734 ntBASIC5.63□□□□□ -1.51
CDH6P55285 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC5.63□□□□□ -1.51
CDH6P55285 SCARNA16.4-201ENST00000516956 187 ntBASIC5.63□□□□□ -1.51
CDH6P55285 AC020937.1-201ENST00000519677 1013 ntBASIC5.63□□□□□ -1.51
CDH6P55285 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.63□□□□□ -1.51
CDH6P55285 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.63□□□□□ -1.51
CDH6P55285 AC078878.1-201ENST00000539832 958 ntBASIC5.63□□□□□ -1.51
CDH6P55285 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.63□□□□□ -1.51
CDH6P55285 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDH6P55285 MIR1273E-201ENST00000581165 102 ntBASIC5.63□□□□□ -1.51
CDH6P55285 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.63□□□□□ -1.51
CDH6P55285 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.63□□□□□ -1.51
CDH6P55285 AC026124.2-201ENST00000621847 656 ntBASIC5.63□□□□□ -1.51
CDH6P55285 AC073869.7-201ENST00000640874 297 ntBASIC5.63□□□□□ -1.51
CDH6P55285 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDH6P55285 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.63□□□□□ -1.51
CDH6P55285 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.63□□□□□ -1.51
CDH6P55285 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.63□□□□□ -1.51
CDH6P55285 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
CDH6P55285 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.63□□□□□ -1.51
CDH6P55285 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.63□□□□□ -1.51
CDH6P55285 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
CDH6P55285 Z83820.1-201ENST00000456978 1499 ntBASIC5.63□□□□□ -1.51
CDH6P55285 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.63□□□□□ -1.51
CDH6P55285 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CDH6P55285 ZNF569-203ENST00000392150 1918 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDH6P55285 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.62□□□□□ -1.51
CDH6P55285 PARD3B-212ENST00000613457 7559 ntTSL 5 BASIC5.62□□□□□ -1.51
CDH6P55285 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CDH6P55285 TET1P1-201ENST00000426627 2301 ntBASIC5.62□□□□□ -1.51
CDH6P55285 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms