Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 AL133406.3-201ENST00000606817 541 ntBASIC7.5□□□□□ -1.21
CLTCL1P53675 AL139124.1-201ENST00000609123 421 ntBASIC7.5□□□□□ -1.21
CLTCL1P53675 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CLTCL1P53675 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC7.5□□□□□ -1.21
CLTCL1P53675 VPS35-201ENST00000299138 6790 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
CLTCL1P53675 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC7.5□□□□□ -1.21
CLTCL1P53675 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
CLTCL1P53675 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CLTCL1P53675 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CLTCL1P53675 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
CLTCL1P53675 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC7.5□□□□□ -1.21
CLTCL1P53675 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
CLTCL1P53675 AL355488.2-201ENST00000609909 2850 ntBASIC7.5□□□□□ -1.21
CLTCL1P53675 DNAH17-202ENST00000585328 13708 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
CLTCL1P53675 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
CLTCL1P53675 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CLTCL1P53675 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CLTCL1P53675 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC7.49□□□□□ -1.21
CLTCL1P53675 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CLTCL1P53675 CHMP1B2P-201ENST00000399581 597 ntBASIC7.49□□□□□ -1.21
CLTCL1P53675 HSPA8P15-201ENST00000401676 786 ntBASIC7.49□□□□□ -1.21
CLTCL1P53675 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC7.49□□□□□ -1.21
CLTCL1P53675 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC7.49□□□□□ -1.21
CLTCL1P53675 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC7.49□□□□□ -1.21
CLTCL1P53675 GCSHP4-201ENST00000538792 439 ntBASIC7.49□□□□□ -1.21
CLTCL1P53675 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC7.49□□□□□ -1.21
CLTCL1P53675 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC7.49□□□□□ -1.21
CLTCL1P53675 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC7.49□□□□□ -1.21
CLTCL1P53675 AC068790.7-201ENST00000602347 528 ntBASIC7.49□□□□□ -1.21
CLTCL1P53675 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC7.49□□□□□ -1.21
CLTCL1P53675 PCBP1-AS1-278ENST00000625518 864 ntTSL 5 BASIC7.49□□□□□ -1.21
CLTCL1P53675 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC7.49□□□□□ -1.21
CLTCL1P53675 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC7.49□□□□□ -1.21
CLTCL1P53675 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CLTCL1P53675 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
CLTCL1P53675 PYROXD1-205ENST00000538582 3639 ntTSL 2 BASIC7.49□□□□□ -1.21
CLTCL1P53675 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC7.49□□□□□ -1.21
CLTCL1P53675 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC7.49□□□□□ -1.21
CLTCL1P53675 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CLTCL1P53675 HSPA8P14-201ENST00000552265 1805 ntBASIC7.49□□□□□ -1.21
CLTCL1P53675 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC7.49□□□□□ -1.21
CLTCL1P53675 PDS5B-201ENST00000315596 7497 ntAPPRIS P1 TSL 1 (best) BASIC7.49□□□□□ -1.21
CLTCL1P53675 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CLTCL1P53675 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC7.49□□□□□ -1.21
CLTCL1P53675 FAR2P2-201ENST00000413041 594 ntBASIC7.49□□□□□ -1.21
CLTCL1P53675 FAR2P4-202ENST00000425399 584 ntBASIC7.49□□□□□ -1.21
CLTCL1P53675 AL049745.1-201ENST00000433953 286 ntBASIC7.49□□□□□ -1.21
CLTCL1P53675 MED28P3-201ENST00000444288 531 ntBASIC7.49□□□□□ -1.21
CLTCL1P53675 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC7.49□□□□□ -1.21
CLTCL1P53675 HMGN1P9-201ENST00000515212 298 ntBASIC7.49□□□□□ -1.21
CLTCL1P53675 AC005000.1-201ENST00000536192 288 ntBASIC7.49□□□□□ -1.21
CLTCL1P53675 ELOCP28-201ENST00000590044 317 ntBASIC7.49□□□□□ -1.21
CLTCL1P53675 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC7.49□□□□□ -1.21
CLTCL1P53675 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CLTCL1P53675 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC7.48□□□□□ -1.21
CLTCL1P53675 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CLTCL1P53675 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CLTCL1P53675 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CLTCL1P53675 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC7.48□□□□□ -1.21
CLTCL1P53675 EFNA5-206ENST00000611503 4933 ntTSL 5 BASIC7.48□□□□□ -1.21
CLTCL1P53675 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CLTCL1P53675 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CLTCL1P53675 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CLTCL1P53675 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
CLTCL1P53675 OR9G4-201ENST00000302957 984 ntBASIC7.48□□□□□ -1.21
CLTCL1P53675 MIR600-201ENST00000385007 98 ntBASIC7.48□□□□□ -1.21
CLTCL1P53675 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CLTCL1P53675 TRAJ38-201ENST00000390499 62 ntAPPRIS P1 BASIC7.48□□□□□ -1.21
CLTCL1P53675 AC013442.1-201ENST00000397347 228 ntBASIC7.48□□□□□ -1.21
CLTCL1P53675 OR2AM1P-201ENST00000422137 422 ntBASIC7.48□□□□□ -1.21
CLTCL1P53675 IMPA1P1-201ENST00000510718 842 ntBASIC7.48□□□□□ -1.21
CLTCL1P53675 OR7E128P-201ENST00000532736 1024 ntBASIC7.48□□□□□ -1.21
CLTCL1P53675 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC7.48□□□□□ -1.21
CLTCL1P53675 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC7.48□□□□□ -1.21
CLTCL1P53675 AC005377.1-201ENST00000605126 456 ntBASIC7.48□□□□□ -1.21
CLTCL1P53675 AL356608.1-201ENST00000610034 820 ntBASIC7.48□□□□□ -1.21
CLTCL1P53675 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CLTCL1P53675 AC132825.1-201ENST00000463573 2247 ntBASIC7.48□□□□□ -1.21
CLTCL1P53675 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
CLTCL1P53675 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC7.47□□□□□ -1.21
CLTCL1P53675 ABL2-201ENST00000344730 6910 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
CLTCL1P53675 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
CLTCL1P53675 OR2T12-202ENST00000641276 5708 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
CLTCL1P53675 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CLTCL1P53675 RN7SKP145-201ENST00000363291 303 ntBASIC7.47□□□□□ -1.21
CLTCL1P53675 AC019050.1-201ENST00000418508 492 ntBASIC7.47□□□□□ -1.21
CLTCL1P53675 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC7.47□□□□□ -1.21
CLTCL1P53675 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC7.47□□□□□ -1.21
CLTCL1P53675 AL354714.3-201ENST00000447284 493 ntBASIC7.47□□□□□ -1.21
CLTCL1P53675 RPL31P44-201ENST00000447680 377 ntBASIC7.47□□□□□ -1.21
CLTCL1P53675 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
CLTCL1P53675 OR51A1P-201ENST00000511110 946 ntBASIC7.47□□□□□ -1.21
CLTCL1P53675 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC7.47□□□□□ -1.21
CLTCL1P53675 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC7.47□□□□□ -1.21
CLTCL1P53675 AC018552.1-201ENST00000562099 811 ntBASIC7.47□□□□□ -1.21
CLTCL1P53675 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC7.47□□□□□ -1.21
CLTCL1P53675 SELE-204ENST00000367776 3576 ntTSL 5 BASIC7.47□□□□□ -1.21
CLTCL1P53675 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
CLTCL1P53675 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
CLTCL1P53675 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms