Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC5.79□□□□□ -1.48
LIMK1P53667 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC5.79□□□□□ -1.48
LIMK1P53667 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.79□□□□□ -1.48
LIMK1P53667 OR7A1P-202ENST00000641542 1158 ntBASIC5.79□□□□□ -1.48
LIMK1P53667 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
LIMK1P53667 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LIMK1P53667 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
LIMK1P53667 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
LIMK1P53667 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
LIMK1P53667 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
LIMK1P53667 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LIMK1P53667 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LIMK1P53667 PARP4P2-201ENST00000446672 3326 ntBASIC5.78□□□□□ -1.48
LIMK1P53667 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
LIMK1P53667 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
LIMK1P53667 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LIMK1P53667 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LIMK1P53667 RNA5SP478-201ENST00000364657 115 ntBASIC5.78□□□□□ -1.48
LIMK1P53667 PEX12P1-201ENST00000400284 1048 ntBASIC5.78□□□□□ -1.48
LIMK1P53667 MRPL53P1-201ENST00000414323 319 ntBASIC5.78□□□□□ -1.48
LIMK1P53667 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC5.78□□□□□ -1.48
LIMK1P53667 GNG5P5-201ENST00000420444 220 ntBASIC5.78□□□□□ -1.48
LIMK1P53667 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.78□□□□□ -1.48
LIMK1P53667 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LIMK1P53667 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.78□□□□□ -1.48
LIMK1P53667 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.78□□□□□ -1.48
LIMK1P53667 AL445928.1-201ENST00000435545 222 ntBASIC5.78□□□□□ -1.48
LIMK1P53667 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.78□□□□□ -1.48
LIMK1P53667 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.78□□□□□ -1.48
LIMK1P53667 AC009963.4-201ENST00000448535 339 ntBASIC5.78□□□□□ -1.48
LIMK1P53667 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.78□□□□□ -1.48
LIMK1P53667 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.78□□□□□ -1.48
LIMK1P53667 RPS21P4-201ENST00000487122 248 ntBASIC5.78□□□□□ -1.48
LIMK1P53667 AC004889.1-208ENST00000489077 423 ntTSL 3 BASIC5.78□□□□□ -1.48
LIMK1P53667 RN7SL808P-201ENST00000496066 299 ntBASIC5.78□□□□□ -1.48
LIMK1P53667 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LIMK1P53667 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
LIMK1P53667 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC5.78□□□□□ -1.48
LIMK1P53667 NPM1P52-201ENST00000518264 846 ntBASIC5.78□□□□□ -1.48
LIMK1P53667 CR383656.6-201ENST00000550518 394 ntBASIC5.78□□□□□ -1.48
LIMK1P53667 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.78□□□□□ -1.48
LIMK1P53667 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC5.78□□□□□ -1.48
LIMK1P53667 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.78□□□□□ -1.48
LIMK1P53667 AC025857.2-201ENST00000602711 238 ntBASIC5.78□□□□□ -1.48
LIMK1P53667 SUGT1P3-202ENST00000604259 383 ntBASIC5.78□□□□□ -1.48
LIMK1P53667 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.78□□□□□ -1.48
LIMK1P53667 OR7M1P-201ENST00000608946 533 ntBASIC5.78□□□□□ -1.48
LIMK1P53667 AP001784.1-201ENST00000624107 428 ntBASIC5.78□□□□□ -1.48
LIMK1P53667 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LIMK1P53667 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
LIMK1P53667 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LIMK1P53667 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC5.78□□□□□ -1.48
LIMK1P53667 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC5.78□□□□□ -1.48
LIMK1P53667 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
LIMK1P53667 GUCY1B2-204ENST00000531898 1979 ntBASIC5.78□□□□□ -1.48
LIMK1P53667 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.78□□□□□ -1.48
LIMK1P53667 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.78□□□□□ -1.48
LIMK1P53667 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.78□□□□□ -1.48
LIMK1P53667 AC239809.3-214ENST00000496508 2513 ntTSL 2 BASIC5.78□□□□□ -1.48
LIMK1P53667 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.78□□□□□ -1.48
LIMK1P53667 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.78□□□□□ -1.48
LIMK1P53667 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
LIMK1P53667 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
LIMK1P53667 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.48
LIMK1P53667 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LIMK1P53667 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LIMK1P53667 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
LIMK1P53667 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
LIMK1P53667 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
LIMK1P53667 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.77□□□□□ -1.49
LIMK1P53667 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
LIMK1P53667 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.77□□□□□ -1.49
LIMK1P53667 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
LIMK1P53667 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LIMK1P53667 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
LIMK1P53667 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.77□□□□□ -1.49
LIMK1P53667 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC5.77□□□□□ -1.49
LIMK1P53667 AC026523.2-201ENST00000625039 7739 ntBASIC5.77□□□□□ -1.49
LIMK1P53667 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
LIMK1P53667 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.77□□□□□ -1.49
LIMK1P53667 MIR765-201ENST00000390226 114 ntBASIC5.77□□□□□ -1.49
LIMK1P53667 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
LIMK1P53667 EI24P3-201ENST00000399046 1062 ntBASIC5.77□□□□□ -1.49
LIMK1P53667 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.77□□□□□ -1.49
LIMK1P53667 EEF1A1P29-201ENST00000416082 1096 ntBASIC5.77□□□□□ -1.49
LIMK1P53667 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.77□□□□□ -1.49
LIMK1P53667 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.77□□□□□ -1.49
LIMK1P53667 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.77□□□□□ -1.49
LIMK1P53667 CCNB1IP1P1-201ENST00000428976 839 ntBASIC5.77□□□□□ -1.49
LIMK1P53667 RPS12P17-201ENST00000438591 377 ntBASIC5.77□□□□□ -1.49
LIMK1P53667 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC5.77□□□□□ -1.49
LIMK1P53667 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC5.77□□□□□ -1.49
LIMK1P53667 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.77□□□□□ -1.49
LIMK1P53667 OR13K1P-201ENST00000444577 975 ntBASIC5.77□□□□□ -1.49
LIMK1P53667 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.77□□□□□ -1.49
LIMK1P53667 AL445687.2-201ENST00000458156 728 ntBASIC5.77□□□□□ -1.49
LIMK1P53667 DAP3-209ENST00000465375 729 ntTSL 2 BASIC5.77□□□□□ -1.49
LIMK1P53667 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.77□□□□□ -1.49
LIMK1P53667 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
LIMK1P53667 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms