Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COPAP53621 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC6.17□□□□□ -1.42
COPAP53621 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COPAP53621 OR52B3P-201ENST00000314715 928 ntBASIC6.17□□□□□ -1.42
COPAP53621 RNU6-249P-201ENST00000363016 102 ntBASIC6.17□□□□□ -1.42
COPAP53621 OR13C3-201ENST00000374781 1108 ntBASIC6.17□□□□□ -1.42
COPAP53621 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC6.17□□□□□ -1.42
COPAP53621 MIR433-201ENST00000384837 93 ntBASIC6.17□□□□□ -1.42
COPAP53621 AC005522.1-201ENST00000395416 346 ntBASIC6.17□□□□□ -1.42
COPAP53621 RN7SKP151-201ENST00000410230 316 ntBASIC6.17□□□□□ -1.42
COPAP53621 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC6.17□□□□□ -1.42
COPAP53621 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC6.17□□□□□ -1.42
COPAP53621 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC6.17□□□□□ -1.42
COPAP53621 AL645638.1-201ENST00000440519 361 ntBASIC6.17□□□□□ -1.42
COPAP53621 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
COPAP53621 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC6.17□□□□□ -1.42
COPAP53621 HMGN1P5-201ENST00000448591 263 ntBASIC6.17□□□□□ -1.42
COPAP53621 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.17□□□□□ -1.42
COPAP53621 RPL31P15-201ENST00000449770 338 ntBASIC6.17□□□□□ -1.42
COPAP53621 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.17□□□□□ -1.42
COPAP53621 NXT1P1-201ENST00000458481 316 ntBASIC6.17□□□□□ -1.42
COPAP53621 RPSAP37-201ENST00000470913 821 ntBASIC6.17□□□□□ -1.42
COPAP53621 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC6.17□□□□□ -1.42
COPAP53621 SH3GLB1-202ENST00000482504 1199 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COPAP53621 RPEP1-201ENST00000504507 658 ntBASIC6.17□□□□□ -1.42
COPAP53621 AC011411.1-201ENST00000509592 876 ntBASIC6.17□□□□□ -1.42
COPAP53621 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC6.17□□□□□ -1.42
COPAP53621 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC6.17□□□□□ -1.42
COPAP53621 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COPAP53621 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.17□□□□□ -1.42
COPAP53621 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC6.17□□□□□ -1.42
COPAP53621 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC6.17□□□□□ -1.42
COPAP53621 AP003386.1-201ENST00000526509 504 ntTSL 3 BASIC6.17□□□□□ -1.42
COPAP53621 AC079089.1-204ENST00000530194 572 ntTSL 2 BASIC6.17□□□□□ -1.42
COPAP53621 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC6.17□□□□□ -1.42
COPAP53621 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.17□□□□□ -1.42
COPAP53621 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.17□□□□□ -1.42
COPAP53621 AC092121.1-201ENST00000569452 202 ntBASIC6.17□□□□□ -1.42
COPAP53621 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC6.17□□□□□ -1.42
COPAP53621 AC011445.2-201ENST00000599274 173 ntBASIC6.17□□□□□ -1.42
COPAP53621 AC133794.1-201ENST00000602731 914 ntBASIC6.17□□□□□ -1.42
COPAP53621 MTCO3P22-201ENST00000603219 784 ntBASIC6.17□□□□□ -1.42
COPAP53621 AC095038.2-201ENST00000621464 1070 ntBASIC6.17□□□□□ -1.42
COPAP53621 AL357562.1-201ENST00000624911 609 ntBASIC6.17□□□□□ -1.42
COPAP53621 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.17□□□□□ -1.42
COPAP53621 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
COPAP53621 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COPAP53621 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
COPAP53621 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC6.17□□□□□ -1.42
COPAP53621 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
COPAP53621 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
COPAP53621 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC6.17□□□□□ -1.42
COPAP53621 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC6.17□□□□□ -1.42
COPAP53621 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
COPAP53621 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COPAP53621 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
COPAP53621 AC024587.1-201ENST00000505925 2157 ntBASIC6.16□□□□□ -1.42
COPAP53621 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
COPAP53621 RLIMP2-201ENST00000427891 1563 ntBASIC6.16□□□□□ -1.42
COPAP53621 AL121768.1-201ENST00000613917 2544 ntBASIC6.16□□□□□ -1.42
COPAP53621 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
COPAP53621 ELOC-201ENST00000284811 683 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
COPAP53621 OR4K17-201ENST00000315543 1032 ntBASIC6.16□□□□□ -1.42
COPAP53621 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
COPAP53621 RNU1-150P-201ENST00000362491 162 ntBASIC6.16□□□□□ -1.42
COPAP53621 MRRF-207ENST00000373729 870 ntTSL 3 BASIC6.16□□□□□ -1.42
COPAP53621 MIR1203-201ENST00000408812 85 ntBASIC6.16□□□□□ -1.42
COPAP53621 AL096829.1-201ENST00000413677 457 ntBASIC6.16□□□□□ -1.42
COPAP53621 MTND4P11-201ENST00000417020 1058 ntBASIC6.16□□□□□ -1.42
COPAP53621 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.16□□□□□ -1.42
COPAP53621 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.16□□□□□ -1.42
COPAP53621 VN1R37P-201ENST00000419096 748 ntBASIC6.16□□□□□ -1.42
COPAP53621 BX284632.2-201ENST00000421091 399 ntBASIC6.16□□□□□ -1.42
COPAP53621 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC6.16□□□□□ -1.42
COPAP53621 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.16□□□□□ -1.42
COPAP53621 PCBP2P1-201ENST00000437262 977 ntBASIC6.16□□□□□ -1.42
COPAP53621 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.16□□□□□ -1.42
COPAP53621 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
COPAP53621 AL512605.1-202ENST00000441919 381 ntBASIC6.16□□□□□ -1.42
COPAP53621 AL512593.1-201ENST00000444758 779 ntBASIC6.16□□□□□ -1.42
COPAP53621 AL359955.2-201ENST00000445380 353 ntBASIC6.16□□□□□ -1.42
COPAP53621 AL445466.1-201ENST00000448432 357 ntBASIC6.16□□□□□ -1.42
COPAP53621 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC6.16□□□□□ -1.42
COPAP53621 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.16□□□□□ -1.42
COPAP53621 UBFD1P1-201ENST00000473259 814 ntBASIC6.16□□□□□ -1.42
COPAP53621 RN7SL174P-201ENST00000475578 289 ntBASIC6.16□□□□□ -1.42
COPAP53621 AC092865.4-201ENST00000477936 615 ntBASIC6.16□□□□□ -1.42
COPAP53621 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.16□□□□□ -1.42
COPAP53621 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC6.16□□□□□ -1.42
COPAP53621 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.16□□□□□ -1.42
COPAP53621 AC106872.4-201ENST00000510050 523 ntBASIC6.16□□□□□ -1.42
COPAP53621 AC112198.4-201ENST00000515450 351 ntBASIC6.16□□□□□ -1.42
COPAP53621 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC6.16□□□□□ -1.42
COPAP53621 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.16□□□□□ -1.42
COPAP53621 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
COPAP53621 AC004923.2-201ENST00000529649 369 ntBASIC6.16□□□□□ -1.42
COPAP53621 RPA2P3-201ENST00000533268 770 ntBASIC6.16□□□□□ -1.42
COPAP53621 UBTFL9-201ENST00000534504 1148 ntBASIC6.16□□□□□ -1.42
COPAP53621 CD69-203ENST00000536709 1020 ntTSL 2 BASIC6.16□□□□□ -1.42
COPAP53621 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms