Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.87□□□□□ -1.47
CASP4P49662 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
CASP4P49662 MIR323A-201ENST00000362199 86 ntBASIC5.87□□□□□ -1.47
CASP4P49662 RNA5SP335-201ENST00000363817 110 ntBASIC5.87□□□□□ -1.47
CASP4P49662 U3.25-201ENST00000391209 220 ntBASIC5.87□□□□□ -1.47
CASP4P49662 RPL35AP24-201ENST00000413846 330 ntBASIC5.87□□□□□ -1.47
CASP4P49662 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.87□□□□□ -1.47
CASP4P49662 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CASP4P49662 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CASP4P49662 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.87□□□□□ -1.47
CASP4P49662 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.87□□□□□ -1.47
CASP4P49662 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.87□□□□□ -1.47
CASP4P49662 AC009963.4-201ENST00000448535 339 ntBASIC5.87□□□□□ -1.47
CASP4P49662 EIF1P7-201ENST00000487533 337 ntBASIC5.87□□□□□ -1.47
CASP4P49662 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.87□□□□□ -1.47
CASP4P49662 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.87□□□□□ -1.47
CASP4P49662 AC092709.1-201ENST00000521355 1045 ntBASIC5.87□□□□□ -1.47
CASP4P49662 AC027026.1-201ENST00000532323 742 ntBASIC5.87□□□□□ -1.47
CASP4P49662 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
CASP4P49662 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.87□□□□□ -1.47
CASP4P49662 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.87□□□□□ -1.47
CASP4P49662 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC5.87□□□□□ -1.47
CASP4P49662 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC5.87□□□□□ -1.47
CASP4P49662 RN7SL356P-201ENST00000582228 248 ntBASIC5.87□□□□□ -1.47
CASP4P49662 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC5.87□□□□□ -1.47
CASP4P49662 AC005840.5-201ENST00000619166 599 ntBASIC5.87□□□□□ -1.47
CASP4P49662 AC010809.3-201ENST00000621310 641 ntBASIC5.87□□□□□ -1.47
CASP4P49662 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC5.87□□□□□ -1.47
CASP4P49662 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.87□□□□□ -1.47
CASP4P49662 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
CASP4P49662 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CASP4P49662 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CASP4P49662 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
CASP4P49662 AP001029.2-203ENST00000589795 4910 ntBASIC5.87□□□□□ -1.47
CASP4P49662 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
CASP4P49662 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.87□□□□□ -1.47
CASP4P49662 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
CASP4P49662 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
CASP4P49662 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
CASP4P49662 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CASP4P49662 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.86□□□□□ -1.47
CASP4P49662 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CASP4P49662 BRAFP1-201ENST00000445336 2703 ntBASIC5.86□□□□□ -1.47
CASP4P49662 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CASP4P49662 AL078621.3-201ENST00000623707 2042 ntBASIC5.86□□□□□ -1.47
CASP4P49662 CYP4Z2P-201ENST00000423332 1512 ntBASIC5.86□□□□□ -1.47
CASP4P49662 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.86□□□□□ -1.47
CASP4P49662 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CASP4P49662 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.86□□□□□ -1.47
CASP4P49662 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CASP4P49662 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.86□□□□□ -1.47
CASP4P49662 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC5.86□□□□□ -1.47
CASP4P49662 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC5.86□□□□□ -1.47
CASP4P49662 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.86□□□□□ -1.47
CASP4P49662 AC017019.1-201ENST00000426129 261 ntBASIC5.86□□□□□ -1.47
CASP4P49662 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.86□□□□□ -1.47
CASP4P49662 RPL5P2-201ENST00000429598 854 ntBASIC5.86□□□□□ -1.47
CASP4P49662 RPL12P17-201ENST00000432393 498 ntBASIC5.86□□□□□ -1.47
CASP4P49662 CYCSP12-201ENST00000437729 300 ntBASIC5.86□□□□□ -1.47
CASP4P49662 REG1CP-206ENST00000447469 496 ntBASIC5.86□□□□□ -1.47
CASP4P49662 AC090804.1-201ENST00000448870 490 ntBASIC5.86□□□□□ -1.47
CASP4P49662 RPS26P41-201ENST00000450370 284 ntBASIC5.86□□□□□ -1.47
CASP4P49662 RPEP1-201ENST00000504507 658 ntBASIC5.86□□□□□ -1.47
CASP4P49662 AC093815.1-201ENST00000508637 280 ntBASIC5.86□□□□□ -1.47
CASP4P49662 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC5.86□□□□□ -1.47
CASP4P49662 AC021733.2-201ENST00000518830 497 ntBASIC5.86□□□□□ -1.47
CASP4P49662 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
CASP4P49662 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.86□□□□□ -1.47
CASP4P49662 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.86□□□□□ -1.47
CASP4P49662 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CASP4P49662 AC109583.2-201ENST00000617367 129 ntBASIC5.86□□□□□ -1.47
CASP4P49662 AP003400.3-201ENST00000624904 346 ntBASIC5.86□□□□□ -1.47
CASP4P49662 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.86□□□□□ -1.47
CASP4P49662 AL049767.1-202ENST00000637826 242 ntBASIC5.86□□□□□ -1.47
CASP4P49662 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.86□□□□□ -1.47
CASP4P49662 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CASP4P49662 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
CASP4P49662 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CASP4P49662 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
CASP4P49662 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.85□□□□□ -1.47
CASP4P49662 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CASP4P49662 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CASP4P49662 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CASP4P49662 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CASP4P49662 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CASP4P49662 RNA5SP132-201ENST00000364725 118 ntBASIC5.85□□□□□ -1.47
CASP4P49662 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.85□□□□□ -1.47
CASP4P49662 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.85□□□□□ -1.47
CASP4P49662 CYCSP6-201ENST00000434498 302 ntBASIC5.85□□□□□ -1.47
CASP4P49662 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.85□□□□□ -1.47
CASP4P49662 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC5.85□□□□□ -1.47
CASP4P49662 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.85□□□□□ -1.47
CASP4P49662 AC093827.1-201ENST00000480094 861 ntBASIC5.85□□□□□ -1.47
CASP4P49662 UBA52P7-201ENST00000486088 380 ntBASIC5.85□□□□□ -1.47
CASP4P49662 RPL15P21-201ENST00000495592 567 ntBASIC5.85□□□□□ -1.47
CASP4P49662 AL136038.1-201ENST00000497246 351 ntBASIC5.85□□□□□ -1.47
CASP4P49662 AC105420.1-201ENST00000504389 582 ntBASIC5.85□□□□□ -1.47
CASP4P49662 CDC42P3-201ENST00000518493 633 ntBASIC5.85□□□□□ -1.47
CASP4P49662 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC5.85□□□□□ -1.47
CASP4P49662 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 129.8 ms