Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC5.58□□□□□ -1.52
HNF4AP41235 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
HNF4AP41235 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.58□□□□□ -1.52
HNF4AP41235 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC5.58□□□□□ -1.52
HNF4AP41235 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.58□□□□□ -1.52
HNF4AP41235 SLC35F5-213ENST00000638402 1554 ntTSL 5 BASIC5.58□□□□□ -1.52
HNF4AP41235 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
HNF4AP41235 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
HNF4AP41235 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
HNF4AP41235 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.58□□□□□ -1.52
HNF4AP41235 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
HNF4AP41235 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
HNF4AP41235 TRAPPC6B-201ENST00000330149 3242 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HNF4AP41235 ADAM24P-201ENST00000398655 2101 ntBASIC5.57□□□□□ -1.52
HNF4AP41235 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
HNF4AP41235 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HNF4AP41235 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HNF4AP41235 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
HNF4AP41235 AC007342.7-201ENST00000624610 2337 ntBASIC5.57□□□□□ -1.52
HNF4AP41235 STX3-208ENST00000641815 3236 ntBASIC5.57□□□□□ -1.52
HNF4AP41235 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
HNF4AP41235 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HNF4AP41235 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HNF4AP41235 RNU1-136P-201ENST00000384181 164 ntBASIC5.57□□□□□ -1.52
HNF4AP41235 LYPLA1P3-201ENST00000402650 695 ntBASIC5.57□□□□□ -1.52
HNF4AP41235 AC233289.1-201ENST00000403700 508 ntBASIC5.57□□□□□ -1.52
HNF4AP41235 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.57□□□□□ -1.52
HNF4AP41235 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC5.57□□□□□ -1.52
HNF4AP41235 MRPL53P1-201ENST00000414323 319 ntBASIC5.57□□□□□ -1.52
HNF4AP41235 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HNF4AP41235 AC002069.1-201ENST00000429649 1159 ntBASIC5.57□□□□□ -1.52
HNF4AP41235 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
HNF4AP41235 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC5.57□□□□□ -1.52
HNF4AP41235 RPL12P18-201ENST00000437175 325 ntBASIC5.57□□□□□ -1.52
HNF4AP41235 ARL5AP3-201ENST00000439327 386 ntBASIC5.57□□□□□ -1.52
HNF4AP41235 AL035551.1-201ENST00000446931 348 ntBASIC5.57□□□□□ -1.52
HNF4AP41235 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.57□□□□□ -1.52
HNF4AP41235 AL157385.1-201ENST00000446973 268 ntBASIC5.57□□□□□ -1.52
HNF4AP41235 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.57□□□□□ -1.52
HNF4AP41235 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC5.57□□□□□ -1.52
HNF4AP41235 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HNF4AP41235 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HNF4AP41235 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
HNF4AP41235 RNU6-751P-201ENST00000516382 101 ntBASIC5.57□□□□□ -1.52
HNF4AP41235 RN7SKP70-201ENST00000516655 271 ntBASIC5.57□□□□□ -1.52
HNF4AP41235 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.57□□□□□ -1.52
HNF4AP41235 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC5.57□□□□□ -1.52
HNF4AP41235 AC078820.1-201ENST00000548702 742 ntTSL 3 BASIC5.57□□□□□ -1.52
HNF4AP41235 AC084824.2-201ENST00000548906 345 ntBASIC5.57□□□□□ -1.52
HNF4AP41235 AC087888.1-201ENST00000550884 1254 ntBASIC5.57□□□□□ -1.52
HNF4AP41235 SULT1C2P2-201ENST00000562517 294 ntBASIC5.57□□□□□ -1.52
HNF4AP41235 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC5.57□□□□□ -1.52
HNF4AP41235 CFTRP2-201ENST00000634304 199 ntBASIC5.57□□□□□ -1.52
HNF4AP41235 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HNF4AP41235 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HNF4AP41235 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.57□□□□□ -1.52
HNF4AP41235 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HNF4AP41235 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HNF4AP41235 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
HNF4AP41235 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HNF4AP41235 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HNF4AP41235 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC5.57□□□□□ -1.52
HNF4AP41235 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HNF4AP41235 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.57□□□□□ -1.52
HNF4AP41235 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.57□□□□□ -1.52
HNF4AP41235 AP005435.3-201ENST00000531260 3198 ntBASIC5.57□□□□□ -1.52
HNF4AP41235 AC004158.1-201ENST00000564508 4319 ntBASIC5.57□□□□□ -1.52
HNF4AP41235 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.57□□□□□ -1.52
HNF4AP41235 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HNF4AP41235 ESRRG-204ENST00000361525 5363 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
HNF4AP41235 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
HNF4AP41235 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
HNF4AP41235 NEPNP-201ENST00000404786 1371 ntBASIC5.56□□□□□ -1.52
HNF4AP41235 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
HNF4AP41235 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.56□□□□□ -1.52
HNF4AP41235 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
HNF4AP41235 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
HNF4AP41235 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
HNF4AP41235 MT-RNR2-201ENST00000387347 1559 ntBASIC5.56□□□□□ -1.52
HNF4AP41235 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
HNF4AP41235 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
HNF4AP41235 RNU6-819P-201ENST00000364116 107 ntBASIC5.56□□□□□ -1.52
HNF4AP41235 OOSP1-201ENST00000398992 1270 ntBASIC5.56□□□□□ -1.52
HNF4AP41235 SNORA11.5-201ENST00000408163 128 ntBASIC5.56□□□□□ -1.52
HNF4AP41235 MIR1203-201ENST00000408812 85 ntBASIC5.56□□□□□ -1.52
HNF4AP41235 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.56□□□□□ -1.52
HNF4AP41235 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC5.56□□□□□ -1.52
HNF4AP41235 MTCO1P45-201ENST00000431457 267 ntBASIC5.56□□□□□ -1.52
HNF4AP41235 UBE2V2P3-201ENST00000433562 437 ntBASIC5.56□□□□□ -1.52
HNF4AP41235 AC242426.1-201ENST00000435270 960 ntBASIC5.56□□□□□ -1.52
HNF4AP41235 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.56□□□□□ -1.52
HNF4AP41235 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC5.56□□□□□ -1.52
HNF4AP41235 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.56□□□□□ -1.52
HNF4AP41235 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.56□□□□□ -1.52
HNF4AP41235 RAD1P2-201ENST00000446414 663 ntBASIC5.56□□□□□ -1.52
HNF4AP41235 AL591363.1-201ENST00000450091 483 ntBASIC5.56□□□□□ -1.52
HNF4AP41235 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.56□□□□□ -1.52
HNF4AP41235 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.56□□□□□ -1.52
HNF4AP41235 RPS23P2-201ENST00000463671 415 ntBASIC5.56□□□□□ -1.52
HNF4AP41235 AC104629.2-201ENST00000468627 598 ntBASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms