Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 DDX18P6-201ENST00000450119 1997 ntBASIC5.55□□□□□ -1.52
TRIM23P36406 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM23P36406 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM23P36406 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM23P36406 AC133552.1-201ENST00000569988 4007 ntBASIC5.54□□□□□ -1.52
TRIM23P36406 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
TRIM23P36406 CRB1-203ENST00000367400 4932 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM23P36406 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.54□□□□□ -1.52
TRIM23P36406 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM23P36406 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM23P36406 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC5.54□□□□□ -1.52
TRIM23P36406 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM23P36406 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.54□□□□□ -1.52
TRIM23P36406 RNU1-146P-201ENST00000364015 165 ntBASIC5.54□□□□□ -1.52
TRIM23P36406 RN7SKP28-201ENST00000364770 305 ntBASIC5.54□□□□□ -1.52
TRIM23P36406 GABARAPL3-201ENST00000412799 354 ntBASIC5.54□□□□□ -1.52
TRIM23P36406 CBX1P3-201ENST00000413296 527 ntBASIC5.54□□□□□ -1.52
TRIM23P36406 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.54□□□□□ -1.52
TRIM23P36406 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC5.54□□□□□ -1.52
TRIM23P36406 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC5.54□□□□□ -1.52
TRIM23P36406 KRT8P51-201ENST00000438938 274 ntBASIC5.54□□□□□ -1.52
TRIM23P36406 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC5.54□□□□□ -1.52
TRIM23P36406 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.54□□□□□ -1.52
TRIM23P36406 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM23P36406 RANP1-206ENST00000455094 651 ntBASIC5.54□□□□□ -1.52
TRIM23P36406 RPL12P39-201ENST00000455456 496 ntBASIC5.54□□□□□ -1.52
TRIM23P36406 SIAH1P1-201ENST00000479411 923 ntBASIC5.54□□□□□ -1.52
TRIM23P36406 BX510359.5-201ENST00000515651 304 ntBASIC5.54□□□□□ -1.52
TRIM23P36406 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM23P36406 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM23P36406 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.54□□□□□ -1.52
TRIM23P36406 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.54□□□□□ -1.52
TRIM23P36406 AP000859.1-201ENST00000525536 307 ntBASIC5.54□□□□□ -1.52
TRIM23P36406 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM23P36406 AL136298.1-202ENST00000556520 518 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM23P36406 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM23P36406 AC079414.1-201ENST00000563114 488 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM23P36406 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.54□□□□□ -1.52
TRIM23P36406 AP005901.4-201ENST00000577336 569 ntBASIC5.54□□□□□ -1.52
TRIM23P36406 MIR4489-201ENST00000578869 62 ntBASIC5.54□□□□□ -1.52
TRIM23P36406 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.54□□□□□ -1.52
TRIM23P36406 AC012616.1-201ENST00000600294 197 ntBASIC5.54□□□□□ -1.52
TRIM23P36406 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.54□□□□□ -1.52
TRIM23P36406 AP003400.2-201ENST00000624036 666 ntBASIC5.54□□□□□ -1.52
TRIM23P36406 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC5.54□□□□□ -1.52
TRIM23P36406 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC5.54□□□□□ -1.52
TRIM23P36406 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM23P36406 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC5.54□□□□□ -1.52
TRIM23P36406 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
TRIM23P36406 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM23P36406 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
TRIM23P36406 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM23P36406 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
TRIM23P36406 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM23P36406 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
TRIM23P36406 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.54□□□□□ -1.52
TRIM23P36406 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC5.54□□□□□ -1.52
TRIM23P36406 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
TRIM23P36406 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM23P36406 TTC39DP-201ENST00000416781 1688 ntBASIC5.53□□□□□ -1.52
TRIM23P36406 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM23P36406 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM23P36406 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
TRIM23P36406 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
TRIM23P36406 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
TRIM23P36406 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
TRIM23P36406 KYNUP3-201ENST00000574386 1341 ntBASIC5.53□□□□□ -1.52
TRIM23P36406 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM23P36406 SERPINA9-204ENST00000424550 1462 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM23P36406 ATXN2-215ENST00000542287 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM23P36406 CA1-225ENST00000626824 2405 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM23P36406 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM23P36406 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM23P36406 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
TRIM23P36406 RNA5SP319-201ENST00000362768 119 ntBASIC5.53□□□□□ -1.52
TRIM23P36406 RNA5SP234-201ENST00000363916 119 ntBASIC5.53□□□□□ -1.52
TRIM23P36406 RN7SKP6-201ENST00000364795 319 ntBASIC5.53□□□□□ -1.52
TRIM23P36406 MIR551A-201ENST00000385042 96 ntBASIC5.53□□□□□ -1.52
TRIM23P36406 AC005522.1-201ENST00000395416 346 ntBASIC5.53□□□□□ -1.52
TRIM23P36406 AL009179.1-201ENST00000406085 265 ntBASIC5.53□□□□□ -1.52
TRIM23P36406 NPM1P4-201ENST00000414095 812 ntBASIC5.53□□□□□ -1.52
TRIM23P36406 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM23P36406 OR6D1P-201ENST00000436165 939 ntBASIC5.53□□□□□ -1.52
TRIM23P36406 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM23P36406 RPS4XP12-201ENST00000461747 709 ntBASIC5.53□□□□□ -1.52
TRIM23P36406 AC104849.1-201ENST00000462623 405 ntBASIC5.53□□□□□ -1.52
TRIM23P36406 AC100832.1-201ENST00000471945 383 ntBASIC5.53□□□□□ -1.52
TRIM23P36406 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM23P36406 RN7SL547P-201ENST00000490793 290 ntBASIC5.53□□□□□ -1.52
TRIM23P36406 AC090638.1-201ENST00000498296 909 ntBASIC5.53□□□□□ -1.52
TRIM23P36406 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM23P36406 AC021146.10-201ENST00000515628 706 ntBASIC5.53□□□□□ -1.52
TRIM23P36406 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM23P36406 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
TRIM23P36406 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC5.53□□□□□ -1.52
TRIM23P36406 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM23P36406 AC137627.1-201ENST00000545761 289 ntBASIC5.53□□□□□ -1.52
TRIM23P36406 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.53□□□□□ -1.52
TRIM23P36406 LINC01243-201ENST00000562065 721 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
TRIM23P36406 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms