Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 MRPS21P7-201ENST00000566937 238 ntBASIC5.36□□□□□ -1.55
RORAP35398 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.36□□□□□ -1.55
RORAP35398 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC5.36□□□□□ -1.55
RORAP35398 AC010245.2-201ENST00000606908 1167 ntBASIC5.36□□□□□ -1.55
RORAP35398 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.36□□□□□ -1.55
RORAP35398 BX323046.1-201ENST00000610145 535 ntBASIC5.36□□□□□ -1.55
RORAP35398 AC015660.5-201ENST00000623238 564 ntBASIC5.36□□□□□ -1.55
RORAP35398 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.36□□□□□ -1.55
RORAP35398 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.36□□□□□ -1.55
RORAP35398 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.36□□□□□ -1.55
RORAP35398 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RORAP35398 PIGN-217ENST00000591238 1622 ntTSL 5 BASIC5.36□□□□□ -1.55
RORAP35398 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RORAP35398 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC5.36□□□□□ -1.55
RORAP35398 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RORAP35398 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RORAP35398 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.36□□□□□ -1.55
RORAP35398 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
RORAP35398 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RORAP35398 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.36□□□□□ -1.55
RORAP35398 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.36□□□□□ -1.55
RORAP35398 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RORAP35398 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.35□□□□□ -1.55
RORAP35398 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.35□□□□□ -1.55
RORAP35398 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.35□□□□□ -1.55
RORAP35398 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RORAP35398 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
RORAP35398 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RORAP35398 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
RORAP35398 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
RORAP35398 ADAM24P-201ENST00000398655 2101 ntBASIC5.35□□□□□ -1.55
RORAP35398 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RORAP35398 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RORAP35398 AL158152.1-201ENST00000602652 1435 ntBASIC5.35□□□□□ -1.55
RORAP35398 AC092111.2-201ENST00000611627 1414 ntBASIC5.35□□□□□ -1.55
RORAP35398 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
RORAP35398 AC106870.1-201ENST00000359823 200 ntTSL 3 BASIC5.35□□□□□ -1.55
RORAP35398 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.35□□□□□ -1.55
RORAP35398 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.35□□□□□ -1.55
RORAP35398 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.35□□□□□ -1.55
RORAP35398 AL355433.1-201ENST00000422804 300 ntBASIC5.35□□□□□ -1.55
RORAP35398 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.35□□□□□ -1.55
RORAP35398 CFL1P1-202ENST00000432948 411 ntBASIC5.35□□□□□ -1.55
RORAP35398 AC006335.2-201ENST00000437993 330 ntBASIC5.35□□□□□ -1.55
RORAP35398 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC5.35□□□□□ -1.55
RORAP35398 AL163193.1-201ENST00000444895 788 ntBASIC5.35□□□□□ -1.55
RORAP35398 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.35□□□□□ -1.55
RORAP35398 AP000547.1-201ENST00000454360 617 ntBASIC5.35□□□□□ -1.55
RORAP35398 AC104849.1-201ENST00000462623 405 ntBASIC5.35□□□□□ -1.55
RORAP35398 AC100832.1-201ENST00000471945 383 ntBASIC5.35□□□□□ -1.55
RORAP35398 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC5.35□□□□□ -1.55
RORAP35398 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.35□□□□□ -1.55
RORAP35398 RN7SL547P-201ENST00000490793 290 ntBASIC5.35□□□□□ -1.55
RORAP35398 CXCL11-202ENST00000503860 767 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
RORAP35398 AC008638.1-201ENST00000506035 866 ntBASIC5.35□□□□□ -1.55
RORAP35398 AC027308.1-201ENST00000517993 110 ntBASIC5.35□□□□□ -1.55
RORAP35398 AC138832.1-201ENST00000522871 556 ntBASIC5.35□□□□□ -1.55
RORAP35398 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC5.35□□□□□ -1.55
RORAP35398 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC5.35□□□□□ -1.55
RORAP35398 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.35□□□□□ -1.55
RORAP35398 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.35□□□□□ -1.55
RORAP35398 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.35□□□□□ -1.55
RORAP35398 Z95327.3-201ENST00000610385 572 ntBASIC5.35□□□□□ -1.55
RORAP35398 AL359513.1-201ENST00000614364 557 ntBASIC5.35□□□□□ -1.55
RORAP35398 AC010809.3-201ENST00000621310 641 ntBASIC5.35□□□□□ -1.55
RORAP35398 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.35□□□□□ -1.55
RORAP35398 MIR8080-201ENST00000622224 89 ntBASIC5.35□□□□□ -1.55
RORAP35398 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.35□□□□□ -1.55
RORAP35398 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RORAP35398 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RORAP35398 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RORAP35398 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.35□□□□□ -1.55
RORAP35398 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RORAP35398 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
RORAP35398 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RORAP35398 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
RORAP35398 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
RORAP35398 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
RORAP35398 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RORAP35398 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.34□□□□□ -1.55
RORAP35398 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.34□□□□□ -1.55
RORAP35398 CASC19-255ENST00000641733 1385 ntBASIC5.34□□□□□ -1.55
RORAP35398 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
RORAP35398 OR9K1P-201ENST00000326513 941 ntBASIC5.34□□□□□ -1.55
RORAP35398 RNA5SP187-201ENST00000384400 119 ntBASIC5.34□□□□□ -1.55
RORAP35398 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RORAP35398 SNORA11B-201ENST00000408175 129 ntBASIC5.34□□□□□ -1.55
RORAP35398 RN7SKP59-201ENST00000410520 314 ntBASIC5.34□□□□□ -1.55
RORAP35398 AC002524.1-201ENST00000411687 547 ntBASIC5.34□□□□□ -1.55
RORAP35398 GABARAPL3-201ENST00000412799 354 ntBASIC5.34□□□□□ -1.55
RORAP35398 AL121878.1-201ENST00000418638 859 ntBASIC5.34□□□□□ -1.55
RORAP35398 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.34□□□□□ -1.55
RORAP35398 BX276092.6-201ENST00000430476 250 ntBASIC5.34□□□□□ -1.55
RORAP35398 LYPLA1P1-201ENST00000434514 622 ntBASIC5.34□□□□□ -1.55
RORAP35398 KRT8P51-201ENST00000438938 274 ntBASIC5.34□□□□□ -1.55
RORAP35398 AC019185.1-201ENST00000442718 389 ntBASIC5.34□□□□□ -1.55
RORAP35398 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RORAP35398 MYO5BP2-201ENST00000449815 1277 ntBASIC5.34□□□□□ -1.55
RORAP35398 BX276092.8-201ENST00000455722 250 ntBASIC5.34□□□□□ -1.55
RORAP35398 AC026348.1-201ENST00000462549 1053 ntBASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms