Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC6.26□□□□□ -1.41
HOXC12P31275 PRELID3BP7-201ENST00000503606 469 ntBASIC6.26□□□□□ -1.41
HOXC12P31275 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
HOXC12P31275 AC112198.1-201ENST00000505369 1220 ntBASIC6.26□□□□□ -1.41
HOXC12P31275 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC6.26□□□□□ -1.41
HOXC12P31275 CR383658.1-201ENST00000514609 734 ntBASIC6.26□□□□□ -1.41
HOXC12P31275 RN7SKP70-201ENST00000516655 271 ntBASIC6.26□□□□□ -1.41
HOXC12P31275 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC6.26□□□□□ -1.41
HOXC12P31275 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.26□□□□□ -1.41
HOXC12P31275 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC6.26□□□□□ -1.41
HOXC12P31275 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HOXC12P31275 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.26□□□□□ -1.41
HOXC12P31275 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC6.26□□□□□ -1.41
HOXC12P31275 AL157756.1-203ENST00000553269 600 ntTSL 3 BASIC6.26□□□□□ -1.41
HOXC12P31275 AC007954.1-201ENST00000554198 494 ntBASIC6.26□□□□□ -1.41
HOXC12P31275 AC004825.1-201ENST00000555068 586 ntBASIC6.26□□□□□ -1.41
HOXC12P31275 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.26□□□□□ -1.41
HOXC12P31275 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.26□□□□□ -1.41
HOXC12P31275 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC6.26□□□□□ -1.41
HOXC12P31275 MIR4666A-201ENST00000580160 79 ntBASIC6.26□□□□□ -1.41
HOXC12P31275 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC6.26□□□□□ -1.41
HOXC12P31275 MIR5682-201ENST00000584864 76 ntBASIC6.26□□□□□ -1.41
HOXC12P31275 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC6.26□□□□□ -1.41
HOXC12P31275 AC006270.3-201ENST00000605967 1036 ntBASIC6.26□□□□□ -1.41
HOXC12P31275 AC005332.10-201ENST00000612725 619 ntBASIC6.26□□□□□ -1.41
HOXC12P31275 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC6.26□□□□□ -1.41
HOXC12P31275 RDM1-219ENST00000615378 542 ntTSL 3 BASIC6.26□□□□□ -1.41
HOXC12P31275 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.26□□□□□ -1.41
HOXC12P31275 AL590240.3-201ENST00000621416 943 ntBASIC6.26□□□□□ -1.41
HOXC12P31275 Metazoa_SRP.106-201ENST00000622471 296 ntBASIC6.26□□□□□ -1.41
HOXC12P31275 AL356121.2-201ENST00000624715 780 ntBASIC6.26□□□□□ -1.41
HOXC12P31275 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC6.26□□□□□ -1.41
HOXC12P31275 TEX41-293ENST00000630451 690 ntTSL 5 BASIC6.26□□□□□ -1.41
HOXC12P31275 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
HOXC12P31275 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXC12P31275 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXC12P31275 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXC12P31275 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
HOXC12P31275 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HOXC12P31275 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC6.26□□□□□ -1.41
HOXC12P31275 POT1-AS1-203ENST00000435452 2147 ntTSL 2 BASIC6.26□□□□□ -1.41
HOXC12P31275 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HOXC12P31275 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
HOXC12P31275 NEDD9-216ENST00000620854 4086 ntTSL 5 BASIC6.26□□□□□ -1.41
HOXC12P31275 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXC12P31275 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
HOXC12P31275 AMBN-203ENST00000613447 1997 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
HOXC12P31275 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.26□□□□□ -1.41
HOXC12P31275 TMEM200A-203ENST00000545622 2918 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
HOXC12P31275 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
HOXC12P31275 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC12P31275 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC6.25□□□□□ -1.41
HOXC12P31275 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC6.25□□□□□ -1.41
HOXC12P31275 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC12P31275 SLC36A2-201ENST00000335244 3421 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC12P31275 AC027514.1-201ENST00000588561 1603 ntBASIC6.25□□□□□ -1.41
HOXC12P31275 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC12P31275 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC12P31275 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.25□□□□□ -1.41
HOXC12P31275 AC007342.5-201ENST00000571340 2142 ntBASIC6.25□□□□□ -1.41
HOXC12P31275 CSDE1-204ENST00000369530 3774 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC12P31275 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC12P31275 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC12P31275 KDM4C-215ENST00000543771 3332 ntTSL 2 BASIC6.25□□□□□ -1.41
HOXC12P31275 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC6.25□□□□□ -1.41
HOXC12P31275 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
HOXC12P31275 FUNDC2P3-201ENST00000334716 533 ntBASIC6.25□□□□□ -1.41
HOXC12P31275 SNORA70.5-201ENST00000365519 135 ntBASIC6.25□□□□□ -1.41
HOXC12P31275 FAM204BP-201ENST00000369171 701 ntBASIC6.25□□□□□ -1.41
HOXC12P31275 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC6.25□□□□□ -1.41
HOXC12P31275 RNU6-98P-201ENST00000384173 107 ntBASIC6.25□□□□□ -1.41
HOXC12P31275 RNU6-253P-201ENST00000384730 105 ntBASIC6.25□□□□□ -1.41
HOXC12P31275 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
HOXC12P31275 AC245036.1-201ENST00000391727 309 ntBASIC6.25□□□□□ -1.41
HOXC12P31275 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC6.25□□□□□ -1.41
HOXC12P31275 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.25□□□□□ -1.41
HOXC12P31275 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.25□□□□□ -1.41
HOXC12P31275 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.25□□□□□ -1.41
HOXC12P31275 AL049610.1-201ENST00000423374 372 ntBASIC6.25□□□□□ -1.41
HOXC12P31275 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC6.25□□□□□ -1.41
HOXC12P31275 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC6.25□□□□□ -1.41
HOXC12P31275 AL590103.1-201ENST00000434488 307 ntBASIC6.25□□□□□ -1.41
HOXC12P31275 AC234771.4-201ENST00000441416 730 ntBASIC6.25□□□□□ -1.41
HOXC12P31275 MTCO1P19-201ENST00000443487 500 ntBASIC6.25□□□□□ -1.41
HOXC12P31275 AC004593.1-201ENST00000446246 798 ntTSL 3 BASIC6.25□□□□□ -1.41
HOXC12P31275 MOB4-207ENST00000448447 1021 ntTSL 2 BASIC6.25□□□□□ -1.41
HOXC12P31275 PRDX1P1-201ENST00000449329 596 ntBASIC6.25□□□□□ -1.41
HOXC12P31275 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC6.25□□□□□ -1.41
HOXC12P31275 AL358876.1-201ENST00000453364 1075 ntBASIC6.25□□□□□ -1.41
HOXC12P31275 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.25□□□□□ -1.41
HOXC12P31275 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC6.25□□□□□ -1.41
HOXC12P31275 RN7SL502P-201ENST00000481857 290 ntBASIC6.25□□□□□ -1.41
HOXC12P31275 GAPDHP39-201ENST00000481866 979 ntBASIC6.25□□□□□ -1.41
HOXC12P31275 RN7SL350P-201ENST00000492591 299 ntBASIC6.25□□□□□ -1.41
HOXC12P31275 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC6.25□□□□□ -1.41
HOXC12P31275 AC147055.4-201ENST00000504399 745 ntBASIC6.25□□□□□ -1.41
HOXC12P31275 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC6.25□□□□□ -1.41
HOXC12P31275 HSPE1P23-201ENST00000509838 286 ntBASIC6.25□□□□□ -1.41
HOXC12P31275 AC005699.1-203ENST00000515286 688 ntTSL 3 BASIC6.25□□□□□ -1.41
HOXC12P31275 OR4C2P-201ENST00000530855 1064 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms