Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HOXA13P31271 RPL7P39-201ENST00000481157 744 ntBASIC6.22□□□□□ -1.41
HOXA13P31271 RN7SL727P-201ENST00000482164 296 ntBASIC6.22□□□□□ -1.41
HOXA13P31271 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.22□□□□□ -1.41
HOXA13P31271 AC072052.1-201ENST00000496556 306 ntBASIC6.22□□□□□ -1.41
HOXA13P31271 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC6.22□□□□□ -1.41
HOXA13P31271 RNU6-941P-201ENST00000516346 108 ntBASIC6.22□□□□□ -1.41
HOXA13P31271 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC6.22□□□□□ -1.41
HOXA13P31271 AC004825.1-201ENST00000555068 586 ntBASIC6.22□□□□□ -1.41
HOXA13P31271 AC051619.2-201ENST00000559063 397 ntBASIC6.22□□□□□ -1.41
HOXA13P31271 POU1F1-203ENST00000560656 647 ntTSL 5 BASIC6.22□□□□□ -1.41
HOXA13P31271 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC6.22□□□□□ -1.41
HOXA13P31271 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HOXA13P31271 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
HOXA13P31271 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC6.22□□□□□ -1.41
HOXA13P31271 AC016769.4-201ENST00000616893 535 ntBASIC6.22□□□□□ -1.41
HOXA13P31271 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
HOXA13P31271 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
HOXA13P31271 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HOXA13P31271 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HOXA13P31271 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
HOXA13P31271 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
HOXA13P31271 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HOXA13P31271 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HOXA13P31271 MEIOB-205ENST00000470044 1857 ntTSL 2 BASIC6.22□□□□□ -1.41
HOXA13P31271 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC6.21□□□□□ -1.41
HOXA13P31271 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.41
HOXA13P31271 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.21□□□□□ -1.41
HOXA13P31271 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HOXA13P31271 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HOXA13P31271 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
HOXA13P31271 Y_RNA.62-201ENST00000362840 99 ntBASIC6.21□□□□□ -1.42
HOXA13P31271 NPM1P10-201ENST00000398310 865 ntBASIC6.21□□□□□ -1.42
HOXA13P31271 RIMKLBP2-201ENST00000424737 654 ntBASIC6.21□□□□□ -1.42
HOXA13P31271 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC6.21□□□□□ -1.42
HOXA13P31271 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.21□□□□□ -1.42
HOXA13P31271 LYPLA1P1-201ENST00000434514 622 ntBASIC6.21□□□□□ -1.42
HOXA13P31271 OR52B5P-201ENST00000435337 951 ntBASIC6.21□□□□□ -1.42
HOXA13P31271 CNOT7P2-201ENST00000441051 832 ntBASIC6.21□□□□□ -1.42
HOXA13P31271 IGBP1P3-201ENST00000447449 1000 ntBASIC6.21□□□□□ -1.42
HOXA13P31271 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.21□□□□□ -1.42
HOXA13P31271 SNORD125-201ENST00000459538 96 ntBASIC6.21□□□□□ -1.42
HOXA13P31271 RN7SL172P-201ENST00000460535 303 ntBASIC6.21□□□□□ -1.42
HOXA13P31271 AC078828.1-201ENST00000471993 458 ntTSL 3 BASIC6.21□□□□□ -1.42
HOXA13P31271 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC6.21□□□□□ -1.42
HOXA13P31271 RN7SL447P-201ENST00000494711 245 ntBASIC6.21□□□□□ -1.42
HOXA13P31271 ATG10-208ENST00000513634 618 ntTSL 2 BASIC6.21□□□□□ -1.42
HOXA13P31271 CDC42P3-201ENST00000518493 633 ntBASIC6.21□□□□□ -1.42
HOXA13P31271 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.42
HOXA13P31271 HMGB1P40-201ENST00000525121 540 ntBASIC6.21□□□□□ -1.42
HOXA13P31271 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
HOXA13P31271 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
HOXA13P31271 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.21□□□□□ -1.42
HOXA13P31271 RPL10P14-201ENST00000565265 298 ntBASIC6.21□□□□□ -1.42
HOXA13P31271 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC6.21□□□□□ -1.42
HOXA13P31271 WWOX-217ENST00000620008 450 ntTSL 2 BASIC6.21□□□□□ -1.42
HOXA13P31271 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC6.21□□□□□ -1.42
HOXA13P31271 OR52B5P-202ENST00000641118 1110 ntBASIC6.21□□□□□ -1.42
HOXA13P31271 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HOXA13P31271 CASC8-203ENST00000502082 1420 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
HOXA13P31271 AQP4-201ENST00000383168 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HOXA13P31271 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
HOXA13P31271 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC6.21□□□□□ -1.42
HOXA13P31271 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HOXA13P31271 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.21□□□□□ -1.42
HOXA13P31271 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
HOXA13P31271 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.21□□□□□ -1.42
HOXA13P31271 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
HOXA13P31271 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXA13P31271 AC004076.2-201ENST00000620532 3323 ntBASIC6.2□□□□□ -1.42
HOXA13P31271 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
HOXA13P31271 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
HOXA13P31271 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.2□□□□□ -1.42
HOXA13P31271 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.2□□□□□ -1.42
HOXA13P31271 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXA13P31271 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
HOXA13P31271 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
HOXA13P31271 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
HOXA13P31271 NPM1P38-201ENST00000403835 865 ntBASIC6.2□□□□□ -1.42
HOXA13P31271 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC6.2□□□□□ -1.42
HOXA13P31271 G6PC2-203ENST00000421979 494 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXA13P31271 AL139148.1-201ENST00000427122 680 ntBASIC6.2□□□□□ -1.42
HOXA13P31271 FAM96AP1-201ENST00000430879 482 ntBASIC6.2□□□□□ -1.42
HOXA13P31271 XKRYP6-201ENST00000440468 1116 ntBASIC6.2□□□□□ -1.42
HOXA13P31271 XKRYP3-201ENST00000442113 1116 ntBASIC6.2□□□□□ -1.42
HOXA13P31271 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.2□□□□□ -1.42
HOXA13P31271 RPS23P9-201ENST00000448848 438 ntBASIC6.2□□□□□ -1.42
HOXA13P31271 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC6.2□□□□□ -1.42
HOXA13P31271 AURKAPS1-201ENST00000451805 1212 ntBASIC6.2□□□□□ -1.42
HOXA13P31271 OR52Y1P-201ENST00000452418 828 ntBASIC6.2□□□□□ -1.42
HOXA13P31271 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.2□□□□□ -1.42
HOXA13P31271 snoU13.29-201ENST00000459370 104 ntBASIC6.2□□□□□ -1.42
HOXA13P31271 AC005532.2-201ENST00000467154 373 ntBASIC6.2□□□□□ -1.42
HOXA13P31271 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC6.2□□□□□ -1.42
HOXA13P31271 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXA13P31271 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
HOXA13P31271 AC079841.1-201ENST00000481228 950 ntBASIC6.2□□□□□ -1.42
HOXA13P31271 RPS21P4-201ENST00000487122 248 ntBASIC6.2□□□□□ -1.42
HOXA13P31271 HMGB1P44-201ENST00000508597 572 ntBASIC6.2□□□□□ -1.42
HOXA13P31271 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC6.2□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms