Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC6.72□□□□□ -1.33
TM4SF1P30408 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.72□□□□□ -1.33
TM4SF1P30408 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.72□□□□□ -1.33
TM4SF1P30408 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC6.72□□□□□ -1.33
TM4SF1P30408 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.72□□□□□ -1.33
TM4SF1P30408 SNORD116-30-201ENST00000516468 85 ntBASIC6.72□□□□□ -1.33
TM4SF1P30408 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC6.72□□□□□ -1.33
TM4SF1P30408 AC018809.2-201ENST00000602436 3823 ntBASIC6.72□□□□□ -1.33
TM4SF1P30408 AC009597.2-201ENST00000604659 592 ntBASIC6.72□□□□□ -1.33
TM4SF1P30408 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.72□□□□□ -1.33
TM4SF1P30408 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TM4SF1P30408 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.72□□□□□ -1.33
TM4SF1P30408 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
TM4SF1P30408 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
TM4SF1P30408 AL117339.4-201ENST00000608335 7063 ntBASIC6.72□□□□□ -1.33
TM4SF1P30408 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
TM4SF1P30408 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
TM4SF1P30408 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC6.72□□□□□ -1.33
TM4SF1P30408 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
TM4SF1P30408 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.71□□□□□ -1.33
TM4SF1P30408 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.71□□□□□ -1.33
TM4SF1P30408 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.71□□□□□ -1.33
TM4SF1P30408 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC6.71□□□□□ -1.33
TM4SF1P30408 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
TM4SF1P30408 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.71□□□□□ -1.33
TM4SF1P30408 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC6.71□□□□□ -1.33
TM4SF1P30408 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC6.71□□□□□ -1.33
TM4SF1P30408 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TM4SF1P30408 LINC00347-202ENST00000594461 2371 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TM4SF1P30408 COX6B1P1-201ENST00000415962 213 ntBASIC6.71□□□□□ -1.34
TM4SF1P30408 CLYBL-AS2-201ENST00000430125 695 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TM4SF1P30408 UBE2V2P3-201ENST00000433562 437 ntBASIC6.71□□□□□ -1.34
TM4SF1P30408 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TM4SF1P30408 AL138878.2-201ENST00000440581 1241 ntBASIC6.71□□□□□ -1.34
TM4SF1P30408 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC6.71□□□□□ -1.34
TM4SF1P30408 FCF1P7-201ENST00000451185 558 ntBASIC6.71□□□□□ -1.34
TM4SF1P30408 AC104634.1-201ENST00000452720 462 ntBASIC6.71□□□□□ -1.34
TM4SF1P30408 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC6.71□□□□□ -1.34
TM4SF1P30408 RN7SL459P-201ENST00000481078 302 ntBASIC6.71□□□□□ -1.34
TM4SF1P30408 AC058823.1-201ENST00000485315 474 ntBASIC6.71□□□□□ -1.34
TM4SF1P30408 OR2A3P-201ENST00000493774 953 ntBASIC6.71□□□□□ -1.34
TM4SF1P30408 AC008897.1-201ENST00000494006 347 ntBASIC6.71□□□□□ -1.34
TM4SF1P30408 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC6.71□□□□□ -1.34
TM4SF1P30408 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.71□□□□□ -1.34
TM4SF1P30408 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC6.71□□□□□ -1.34
TM4SF1P30408 IGHVIII-76-1-201ENST00000523776 286 ntBASIC6.71□□□□□ -1.34
TM4SF1P30408 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC6.71□□□□□ -1.34
TM4SF1P30408 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC6.71□□□□□ -1.34
TM4SF1P30408 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC6.71□□□□□ -1.34
TM4SF1P30408 AC009237.13-201ENST00000603193 276 ntBASIC6.71□□□□□ -1.34
TM4SF1P30408 AL133406.3-201ENST00000606817 541 ntBASIC6.71□□□□□ -1.34
TM4SF1P30408 SNORA35B-201ENST00000607417 129 ntBASIC6.71□□□□□ -1.34
TM4SF1P30408 AC018690.1-201ENST00000608144 626 ntBASIC6.71□□□□□ -1.34
TM4SF1P30408 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.71□□□□□ -1.34
TM4SF1P30408 KCNMB3P1-202ENST00000493696 3389 ntBASIC6.71□□□□□ -1.34
TM4SF1P30408 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
TM4SF1P30408 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TM4SF1P30408 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TM4SF1P30408 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.71□□□□□ -1.34
TM4SF1P30408 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
TM4SF1P30408 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.71□□□□□ -1.34
TM4SF1P30408 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TM4SF1P30408 TRAPPC11-209ENST00000512476 2546 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
TM4SF1P30408 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.71□□□□□ -1.34
TM4SF1P30408 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TM4SF1P30408 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TM4SF1P30408 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TM4SF1P30408 MDM4-207ENST00000454264 9926 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TM4SF1P30408 AC010132.2-201ENST00000295493 1043 ntBASIC6.7□□□□□ -1.34
TM4SF1P30408 GNAS-202ENST00000306090 477 ntTSL 5 BASIC6.7□□□□□ -1.34
TM4SF1P30408 RN7SKP95-201ENST00000362860 303 ntBASIC6.7□□□□□ -1.34
TM4SF1P30408 EI24P4-201ENST00000423683 1078 ntBASIC6.7□□□□□ -1.34
TM4SF1P30408 AC096741.1-201ENST00000472250 846 ntBASIC6.7□□□□□ -1.34
TM4SF1P30408 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC6.7□□□□□ -1.34
TM4SF1P30408 AC093267.1-201ENST00000489176 961 ntBASIC6.7□□□□□ -1.34
TM4SF1P30408 AP001960.1-201ENST00000506494 658 ntBASIC6.7□□□□□ -1.34
TM4SF1P30408 AC109464.1-201ENST00000511091 819 ntBASIC6.7□□□□□ -1.34
TM4SF1P30408 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC6.7□□□□□ -1.34
TM4SF1P30408 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC6.7□□□□□ -1.34
TM4SF1P30408 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC6.7□□□□□ -1.34
TM4SF1P30408 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.7□□□□□ -1.34
TM4SF1P30408 OR5AM1P-201ENST00000532136 1032 ntBASIC6.7□□□□□ -1.34
TM4SF1P30408 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.7□□□□□ -1.34
TM4SF1P30408 AC096586.2-201ENST00000610260 441 ntBASIC6.7□□□□□ -1.34
TM4SF1P30408 AP000346.3-201ENST00000622821 210 ntBASIC6.7□□□□□ -1.34
TM4SF1P30408 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.7□□□□□ -1.34
TM4SF1P30408 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.7□□□□□ -1.34
TM4SF1P30408 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.7□□□□□ -1.34
TM4SF1P30408 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC6.7□□□□□ -1.34
TM4SF1P30408 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TM4SF1P30408 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
TM4SF1P30408 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.7□□□□□ -1.34
TM4SF1P30408 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC6.7□□□□□ -1.34
TM4SF1P30408 AL137058.3-201ENST00000624531 3099 ntBASIC6.7□□□□□ -1.34
TM4SF1P30408 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
TM4SF1P30408 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.7□□□□□ -1.34
TM4SF1P30408 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
TM4SF1P30408 NLRP3P1-201ENST00000622303 1785 ntBASIC6.69□□□□□ -1.34
TM4SF1P30408 IRF5P1-201ENST00000504852 2164 ntBASIC6.69□□□□□ -1.34
TM4SF1P30408 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.69□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms