Protein–RNA interactions for Protein: P28370

SMARCA1, Probable global transcription activator SNF2L1, humanhuman

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1P28370 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
SMARCA1P28370 AL031985.1-201ENST00000392713 418 ntBASIC6.67□□□□□ -1.34
SMARCA1P28370 CYP2AC1P-201ENST00000407830 1173 ntBASIC6.67□□□□□ -1.34
SMARCA1P28370 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC6.67□□□□□ -1.34
SMARCA1P28370 AF064860.1-201ENST00000416555 544 ntTSL 3 BASIC6.67□□□□□ -1.34
SMARCA1P28370 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.67□□□□□ -1.34
SMARCA1P28370 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC6.67□□□□□ -1.34
SMARCA1P28370 MARK2P12-201ENST00000420129 585 ntBASIC6.67□□□□□ -1.34
SMARCA1P28370 RPL34P3-201ENST00000421454 338 ntBASIC6.67□□□□□ -1.34
SMARCA1P28370 MORF4L1P7-201ENST00000426038 703 ntBASIC6.67□□□□□ -1.34
SMARCA1P28370 Z99127.2-201ENST00000441426 334 ntBASIC6.67□□□□□ -1.34
SMARCA1P28370 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC6.67□□□□□ -1.34
SMARCA1P28370 OR7E116P-201ENST00000448529 957 ntBASIC6.67□□□□□ -1.34
SMARCA1P28370 RPL31P20-201ENST00000449593 360 ntBASIC6.67□□□□□ -1.34
SMARCA1P28370 MTATP6P14-201ENST00000455189 673 ntBASIC6.67□□□□□ -1.34
SMARCA1P28370 AP002345.1-201ENST00000456493 928 ntBASIC6.67□□□□□ -1.34
SMARCA1P28370 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC6.67□□□□□ -1.34
SMARCA1P28370 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC6.67□□□□□ -1.34
SMARCA1P28370 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.67□□□□□ -1.34
SMARCA1P28370 UBFD1P1-201ENST00000473259 814 ntBASIC6.67□□□□□ -1.34
SMARCA1P28370 AC022336.1-201ENST00000475510 337 ntBASIC6.67□□□□□ -1.34
SMARCA1P28370 RFPL4AP3-201ENST00000515267 345 ntBASIC6.67□□□□□ -1.34
SMARCA1P28370 CYCSP22-201ENST00000517555 339 ntBASIC6.67□□□□□ -1.34
SMARCA1P28370 TSPAN19-204ENST00000532498 998 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
SMARCA1P28370 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC6.67□□□□□ -1.34
SMARCA1P28370 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.67□□□□□ -1.34
SMARCA1P28370 IGBP1P1-201ENST00000554337 1009 ntBASIC6.67□□□□□ -1.34
SMARCA1P28370 AL121839.1-201ENST00000556233 1185 ntBASIC6.67□□□□□ -1.34
SMARCA1P28370 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC6.67□□□□□ -1.34
SMARCA1P28370 NPM1P42-201ENST00000560329 862 ntBASIC6.67□□□□□ -1.34
SMARCA1P28370 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC6.67□□□□□ -1.34
SMARCA1P28370 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.67□□□□□ -1.34
SMARCA1P28370 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC6.67□□□□□ -1.34
SMARCA1P28370 HMGB1P51-201ENST00000605166 638 ntBASIC6.67□□□□□ -1.34
SMARCA1P28370 AC027449.1-201ENST00000608890 407 ntBASIC6.67□□□□□ -1.34
SMARCA1P28370 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC6.67□□□□□ -1.34
SMARCA1P28370 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SMARCA1P28370 AC091046.2-201ENST00000620775 665 ntBASIC6.67□□□□□ -1.34
SMARCA1P28370 AC095038.2-201ENST00000621464 1070 ntBASIC6.67□□□□□ -1.34
SMARCA1P28370 AP000943.4-201ENST00000622912 357 ntBASIC6.67□□□□□ -1.34
SMARCA1P28370 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
SMARCA1P28370 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC6.67□□□□□ -1.34
SMARCA1P28370 MIR193BHG-214ENST00000641765 509 ntBASIC6.67□□□□□ -1.34
SMARCA1P28370 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
SMARCA1P28370 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC6.67□□□□□ -1.34
SMARCA1P28370 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SMARCA1P28370 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
SMARCA1P28370 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SMARCA1P28370 AC009501.3-201ENST00000605001 1352 ntBASIC6.67□□□□□ -1.34
SMARCA1P28370 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
SMARCA1P28370 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.67□□□□□ -1.34
SMARCA1P28370 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.67□□□□□ -1.34
SMARCA1P28370 AL158152.1-201ENST00000602652 1435 ntBASIC6.67□□□□□ -1.34
SMARCA1P28370 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
SMARCA1P28370 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SMARCA1P28370 MFSD8-219ENST00000641228 2559 ntBASIC6.66□□□□□ -1.34
SMARCA1P28370 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SMARCA1P28370 OR4F17-202ENST00000585993 2669 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
SMARCA1P28370 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC6.66□□□□□ -1.34
SMARCA1P28370 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SMARCA1P28370 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.66□□□□□ -1.34
SMARCA1P28370 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SMARCA1P28370 NAV3-201ENST00000397909 9821 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SMARCA1P28370 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
SMARCA1P28370 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SMARCA1P28370 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SMARCA1P28370 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SMARCA1P28370 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
SMARCA1P28370 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
SMARCA1P28370 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
SMARCA1P28370 DNAJA1P3-201ENST00000399417 1194 ntBASIC6.66□□□□□ -1.34
SMARCA1P28370 STAT4-203ENST00000409995 709 ntTSL 5 BASIC6.66□□□□□ -1.34
SMARCA1P28370 BMS1P17-202ENST00000416720 316 ntBASIC6.66□□□□□ -1.34
SMARCA1P28370 AC104843.2-201ENST00000427666 297 ntBASIC6.66□□□□□ -1.34
SMARCA1P28370 MRPL50P1-201ENST00000431951 384 ntBASIC6.66□□□□□ -1.34
SMARCA1P28370 AL389925.1-201ENST00000432257 728 ntBASIC6.66□□□□□ -1.34
SMARCA1P28370 ZNF965P-201ENST00000432501 817 ntBASIC6.66□□□□□ -1.34
SMARCA1P28370 HMGB3P24-201ENST00000433260 622 ntBASIC6.66□□□□□ -1.34
SMARCA1P28370 RAB28P3-201ENST00000448325 597 ntBASIC6.66□□□□□ -1.34
SMARCA1P28370 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC6.66□□□□□ -1.34
SMARCA1P28370 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.66□□□□□ -1.34
SMARCA1P28370 RPS23P6-201ENST00000466136 431 ntBASIC6.66□□□□□ -1.34
SMARCA1P28370 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SMARCA1P28370 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.66□□□□□ -1.34
SMARCA1P28370 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
SMARCA1P28370 MTCO2P9-201ENST00000503214 694 ntBASIC6.66□□□□□ -1.34
SMARCA1P28370 RNU6-319P-201ENST00000516025 108 ntBASIC6.66□□□□□ -1.34
SMARCA1P28370 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.66□□□□□ -1.34
SMARCA1P28370 OR4V1P-201ENST00000525394 1140 ntBASIC6.66□□□□□ -1.34
SMARCA1P28370 HMGB1P42-201ENST00000532126 553 ntBASIC6.66□□□□□ -1.34
SMARCA1P28370 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC6.66□□□□□ -1.34
SMARCA1P28370 DCN-210ENST00000547568 823 ntTSL 3 BASIC6.66□□□□□ -1.34
SMARCA1P28370 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC6.66□□□□□ -1.34
SMARCA1P28370 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC6.66□□□□□ -1.34
SMARCA1P28370 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC6.66□□□□□ -1.34
SMARCA1P28370 AC092868.3-201ENST00000560515 784 ntBASIC6.66□□□□□ -1.34
SMARCA1P28370 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.66□□□□□ -1.34
SMARCA1P28370 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC6.66□□□□□ -1.34
SMARCA1P28370 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
SMARCA1P28370 LSM1P2-201ENST00000604911 322 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms