Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 HMGB1P42-201ENST00000532126 553 ntBASIC5.67□□□□□ -1.5
VCLP18206 RERGL-202ENST00000536890 367 ntTSL 3 BASIC5.67□□□□□ -1.5
VCLP18206 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.67□□□□□ -1.5
VCLP18206 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.67□□□□□ -1.5
VCLP18206 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.67□□□□□ -1.5
VCLP18206 AL049874.4-201ENST00000557593 255 ntBASIC5.67□□□□□ -1.5
VCLP18206 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.67□□□□□ -1.5
VCLP18206 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.67□□□□□ -1.5
VCLP18206 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC5.67□□□□□ -1.5
VCLP18206 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.67□□□□□ -1.5
VCLP18206 AC015802.2-201ENST00000589690 189 ntBASIC5.67□□□□□ -1.5
VCLP18206 AC027243.2-201ENST00000602530 724 ntBASIC5.67□□□□□ -1.5
VCLP18206 HIRAP1-201ENST00000605318 787 ntBASIC5.67□□□□□ -1.5
VCLP18206 AC138473.1-201ENST00000605717 526 ntBASIC5.67□□□□□ -1.5
VCLP18206 AC138965.3-201ENST00000623875 498 ntBASIC5.67□□□□□ -1.5
VCLP18206 AL390318.1-201ENST00000624564 687 ntBASIC5.67□□□□□ -1.5
VCLP18206 SNORA17.5-201ENST00000630429 132 ntBASIC5.67□□□□□ -1.5
VCLP18206 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.67□□□□□ -1.5
VCLP18206 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
VCLP18206 ZNF248-201ENST00000357328 4795 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
VCLP18206 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VCLP18206 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.67□□□□□ -1.5
VCLP18206 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VCLP18206 WAC-209ENST00000428935 1320 ntTSL 2 BASIC5.67□□□□□ -1.5
VCLP18206 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
VCLP18206 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
VCLP18206 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.67□□□□□ -1.5
VCLP18206 OR13C1P-202ENST00000641378 2919 ntBASIC5.67□□□□□ -1.5
VCLP18206 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.66□□□□□ -1.5
VCLP18206 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
VCLP18206 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VCLP18206 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VCLP18206 EYA4-211ENST00000525849 3456 ntTSL 5 BASIC5.66□□□□□ -1.5
VCLP18206 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
VCLP18206 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.66□□□□□ -1.5
VCLP18206 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
VCLP18206 TMSB4XP4-201ENST00000323496 618 ntBASIC5.66□□□□□ -1.5
VCLP18206 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
VCLP18206 RN7SKP292-201ENST00000365522 317 ntBASIC5.66□□□□□ -1.5
VCLP18206 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.66□□□□□ -1.5
VCLP18206 AL357752.1-201ENST00000412817 349 ntBASIC5.66□□□□□ -1.5
VCLP18206 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.66□□□□□ -1.5
VCLP18206 AC104843.2-201ENST00000427666 297 ntBASIC5.66□□□□□ -1.5
VCLP18206 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.66□□□□□ -1.5
VCLP18206 HMGB3P24-201ENST00000433260 622 ntBASIC5.66□□□□□ -1.5
VCLP18206 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC5.66□□□□□ -1.5
VCLP18206 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC5.66□□□□□ -1.5
VCLP18206 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC5.66□□□□□ -1.5
VCLP18206 AL161636.2-201ENST00000445179 927 ntBASIC5.66□□□□□ -1.5
VCLP18206 GAPDHP14-201ENST00000450472 937 ntBASIC5.66□□□□□ -1.5
VCLP18206 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC5.66□□□□□ -1.5
VCLP18206 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.66□□□□□ -1.5
VCLP18206 AC104109.1-201ENST00000498563 436 ntBASIC5.66□□□□□ -1.5
VCLP18206 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.66□□□□□ -1.5
VCLP18206 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.66□□□□□ -1.5
VCLP18206 MTATP6P1-201ENST00000514057 681 ntBASIC5.66□□□□□ -1.5
VCLP18206 AC021678.3-201ENST00000517893 476 ntBASIC5.66□□□□□ -1.5
VCLP18206 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.66□□□□□ -1.5
VCLP18206 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.66□□□□□ -1.5
VCLP18206 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.66□□□□□ -1.5
VCLP18206 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.66□□□□□ -1.5
VCLP18206 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC5.66□□□□□ -1.5
VCLP18206 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.66□□□□□ -1.5
VCLP18206 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.66□□□□□ -1.5
VCLP18206 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.66□□□□□ -1.5
VCLP18206 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.66□□□□□ -1.5
VCLP18206 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VCLP18206 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.66□□□□□ -1.5
VCLP18206 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
VCLP18206 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
VCLP18206 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VCLP18206 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
VCLP18206 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
VCLP18206 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
VCLP18206 AL022311.1-201ENST00000623726 19416 ntBASIC5.66□□□□□ -1.5
VCLP18206 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.66□□□□□ -1.5
VCLP18206 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC5.66□□□□□ -1.5
VCLP18206 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VCLP18206 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.66□□□□□ -1.5
VCLP18206 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.66□□□□□ -1.5
VCLP18206 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
VCLP18206 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
VCLP18206 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
VCLP18206 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.65□□□□□ -1.5
VCLP18206 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
VCLP18206 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
VCLP18206 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
VCLP18206 MIR323A-201ENST00000362199 86 ntBASIC5.65□□□□□ -1.5
VCLP18206 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
VCLP18206 RNA5SP122-201ENST00000384457 108 ntBASIC5.65□□□□□ -1.5
VCLP18206 F9-202ENST00000394090 1272 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
VCLP18206 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
VCLP18206 HMGB1P20-201ENST00000402555 677 ntBASIC5.65□□□□□ -1.5
VCLP18206 RN7SKP286-201ENST00000410894 299 ntBASIC5.65□□□□□ -1.5
VCLP18206 RAB9AP4-201ENST00000415230 609 ntBASIC5.65□□□□□ -1.5
VCLP18206 AL445190.1-201ENST00000416448 288 ntTSL 5 BASIC5.65□□□□□ -1.5
VCLP18206 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.65□□□□□ -1.5
VCLP18206 AC127526.2-201ENST00000426436 775 ntBASIC5.65□□□□□ -1.5
VCLP18206 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC5.65□□□□□ -1.5
VCLP18206 AC242426.1-201ENST00000435270 960 ntBASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms