Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC6.56□□□□□ -1.36
PTPN1P18031 OR7E156P-201ENST00000400303 464 ntBASIC6.56□□□□□ -1.36
PTPN1P18031 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC6.56□□□□□ -1.36
PTPN1P18031 RNA5SP156-201ENST00000410250 110 ntBASIC6.56□□□□□ -1.36
PTPN1P18031 RN7SKP182-201ENST00000410772 298 ntBASIC6.56□□□□□ -1.36
PTPN1P18031 RN7SKP161-201ENST00000411110 305 ntBASIC6.56□□□□□ -1.36
PTPN1P18031 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC6.56□□□□□ -1.36
PTPN1P18031 MFSD13B-201ENST00000420133 1290 ntBASIC6.56□□□□□ -1.36
PTPN1P18031 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC6.56□□□□□ -1.36
PTPN1P18031 RPP40P1-201ENST00000426762 456 ntBASIC6.56□□□□□ -1.36
PTPN1P18031 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.56□□□□□ -1.36
PTPN1P18031 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC6.56□□□□□ -1.36
PTPN1P18031 AC096638.2-201ENST00000434965 711 ntBASIC6.56□□□□□ -1.36
PTPN1P18031 AC110602.1-201ENST00000437414 318 ntBASIC6.56□□□□□ -1.36
PTPN1P18031 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.56□□□□□ -1.36
PTPN1P18031 AL138899.2-201ENST00000439139 499 ntBASIC6.56□□□□□ -1.36
PTPN1P18031 AL022237.1-201ENST00000446663 358 ntBASIC6.56□□□□□ -1.36
PTPN1P18031 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC6.56□□□□□ -1.36
PTPN1P18031 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PTPN1P18031 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC6.56□□□□□ -1.36
PTPN1P18031 AC002553.3-201ENST00000453002 341 ntBASIC6.56□□□□□ -1.36
PTPN1P18031 RPS27AP3-201ENST00000453803 454 ntBASIC6.56□□□□□ -1.36
PTPN1P18031 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC6.56□□□□□ -1.36
PTPN1P18031 RN7SL221P-201ENST00000466190 281 ntBASIC6.56□□□□□ -1.36
PTPN1P18031 RPS4XP6-201ENST00000477670 797 ntBASIC6.56□□□□□ -1.36
PTPN1P18031 AC135999.1-201ENST00000478962 479 ntBASIC6.56□□□□□ -1.36
PTPN1P18031 AP002884.1-201ENST00000479691 655 ntBASIC6.56□□□□□ -1.36
PTPN1P18031 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PTPN1P18031 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.56□□□□□ -1.36
PTPN1P18031 CR383658.1-201ENST00000514609 734 ntBASIC6.56□□□□□ -1.36
PTPN1P18031 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.56□□□□□ -1.36
PTPN1P18031 IGKV3D-25-201ENST00000519599 235 ntBASIC6.56□□□□□ -1.36
PTPN1P18031 TOMM20P1-201ENST00000534518 427 ntBASIC6.56□□□□□ -1.36
PTPN1P18031 REXO2-218ENST00000544827 880 ntTSL 3 BASIC6.56□□□□□ -1.36
PTPN1P18031 AP003717.3-201ENST00000544832 1180 ntBASIC6.56□□□□□ -1.36
PTPN1P18031 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.56□□□□□ -1.36
PTPN1P18031 AC090115.2-201ENST00000548060 883 ntBASIC6.56□□□□□ -1.36
PTPN1P18031 AC092332.1-201ENST00000563684 829 ntBASIC6.56□□□□□ -1.36
PTPN1P18031 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.56□□□□□ -1.36
PTPN1P18031 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC6.56□□□□□ -1.36
PTPN1P18031 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC6.56□□□□□ -1.36
PTPN1P18031 AC008555.7-201ENST00000605008 583 ntBASIC6.56□□□□□ -1.36
PTPN1P18031 AC092106.3-201ENST00000611308 722 ntBASIC6.56□□□□□ -1.36
PTPN1P18031 AL512652.1-201ENST00000619006 500 ntBASIC6.56□□□□□ -1.36
PTPN1P18031 AC096708.4-201ENST00000620563 552 ntBASIC6.56□□□□□ -1.36
PTPN1P18031 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PTPN1P18031 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC6.56□□□□□ -1.36
PTPN1P18031 AL390318.1-201ENST00000624564 687 ntBASIC6.56□□□□□ -1.36
PTPN1P18031 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.56□□□□□ -1.36
PTPN1P18031 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PTPN1P18031 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
PTPN1P18031 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.56□□□□□ -1.36
PTPN1P18031 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
PTPN1P18031 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PTPN1P18031 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC6.56□□□□□ -1.36
PTPN1P18031 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PTPN1P18031 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
PTPN1P18031 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
PTPN1P18031 FSTL5-201ENST00000306100 4831 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
PTPN1P18031 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PTPN1P18031 Z98755.1-201ENST00000407015 1384 ntBASIC6.56□□□□□ -1.36
PTPN1P18031 HDAC1P2-201ENST00000453661 1398 ntBASIC6.56□□□□□ -1.36
PTPN1P18031 AL354854.1-201ENST00000455940 1363 ntBASIC6.56□□□□□ -1.36
PTPN1P18031 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.55□□□□□ -1.36
PTPN1P18031 CDY11P-201ENST00000447168 1651 ntBASIC6.55□□□□□ -1.36
PTPN1P18031 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PTPN1P18031 AC022325.1-201ENST00000502748 2199 ntBASIC6.55□□□□□ -1.36
PTPN1P18031 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.55□□□□□ -1.36
PTPN1P18031 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PTPN1P18031 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
PTPN1P18031 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
PTPN1P18031 AC009135.2-201ENST00000624136 1768 ntBASIC6.55□□□□□ -1.36
PTPN1P18031 COX6B1P3-201ENST00000312310 260 ntBASIC6.55□□□□□ -1.36
PTPN1P18031 RNU1-134P-201ENST00000362935 165 ntBASIC6.55□□□□□ -1.36
PTPN1P18031 RNA5SP433-201ENST00000364491 114 ntBASIC6.55□□□□□ -1.36
PTPN1P18031 RNU6-1242P-201ENST00000391052 103 ntBASIC6.55□□□□□ -1.36
PTPN1P18031 MIR1302-8-201ENST00000408342 128 ntBASIC6.55□□□□□ -1.36
PTPN1P18031 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC6.55□□□□□ -1.36
PTPN1P18031 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.55□□□□□ -1.36
PTPN1P18031 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC6.55□□□□□ -1.36
PTPN1P18031 RPS3AP37-201ENST00000419176 745 ntBASIC6.55□□□□□ -1.36
PTPN1P18031 EIF4A1P1-201ENST00000420241 934 ntBASIC6.55□□□□□ -1.36
PTPN1P18031 VTCN1-204ENST00000430871 569 ntTSL 5 BASIC6.55□□□□□ -1.36
PTPN1P18031 AL353662.1-201ENST00000439099 327 ntBASIC6.55□□□□□ -1.36
PTPN1P18031 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC6.55□□□□□ -1.36
PTPN1P18031 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.55□□□□□ -1.36
PTPN1P18031 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC6.55□□□□□ -1.36
PTPN1P18031 ART2BP-201ENST00000453501 499 ntBASIC6.55□□□□□ -1.36
PTPN1P18031 AC073594.1-201ENST00000462065 364 ntBASIC6.55□□□□□ -1.36
PTPN1P18031 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.55□□□□□ -1.36
PTPN1P18031 SOX2-OT-216ENST00000497122 578 ntTSL 4 BASIC6.55□□□□□ -1.36
PTPN1P18031 LINC02198-201ENST00000504280 810 ntTSL 3 BASIC6.55□□□□□ -1.36
PTPN1P18031 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC6.55□□□□□ -1.36
PTPN1P18031 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC6.55□□□□□ -1.36
PTPN1P18031 RNU6-1334P-201ENST00000516032 105 ntBASIC6.55□□□□□ -1.36
PTPN1P18031 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.55□□□□□ -1.36
PTPN1P18031 AC005363.1-201ENST00000530779 351 ntBASIC6.55□□□□□ -1.36
PTPN1P18031 MTCO2P15-201ENST00000532655 656 ntBASIC6.55□□□□□ -1.36
PTPN1P18031 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC6.55□□□□□ -1.36
PTPN1P18031 STARD6-202ENST00000577499 696 ntTSL 2 BASIC6.55□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms