Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AL162377.2-201ENST00000624532 337 ntBASIC6.39□□□□□ -1.39
COL6A2P12110 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.39□□□□□ -1.39
COL6A2P12110 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.39□□□□□ -1.39
COL6A2P12110 ZNF542P-204ENST00000482727 1305 ntBASIC6.39□□□□□ -1.39
COL6A2P12110 KYNUP2-201ENST00000582280 1329 ntBASIC6.39□□□□□ -1.39
COL6A2P12110 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COL6A2P12110 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.39□□□□□ -1.39
COL6A2P12110 MS4A6A-213ENST00000530839 1383 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
COL6A2P12110 AL049737.1-201ENST00000413920 1403 ntBASIC6.39□□□□□ -1.39
COL6A2P12110 TRIM75P-201ENST00000503032 1407 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
COL6A2P12110 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
COL6A2P12110 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
COL6A2P12110 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COL6A2P12110 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COL6A2P12110 AC092070.2-203ENST00000598377 3644 ntBASIC6.39□□□□□ -1.39
COL6A2P12110 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
COL6A2P12110 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.39□□□□□ -1.39
COL6A2P12110 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
COL6A2P12110 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
COL6A2P12110 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
COL6A2P12110 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL6A2P12110 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL6A2P12110 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL6A2P12110 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
COL6A2P12110 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
COL6A2P12110 OR4F16-201ENST00000332831 995 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
COL6A2P12110 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
COL6A2P12110 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL6A2P12110 MRPS6P2-201ENST00000381143 370 ntBASIC6.38□□□□□ -1.39
COL6A2P12110 MIR27A-201ENST00000385073 78 ntBASIC6.38□□□□□ -1.39
COL6A2P12110 RNA5SP35-201ENST00000391257 129 ntBASIC6.38□□□□□ -1.39
COL6A2P12110 AL391419.1-201ENST00000398901 1275 ntBASIC6.38□□□□□ -1.39
COL6A2P12110 AL136100.1-201ENST00000407696 330 ntBASIC6.38□□□□□ -1.39
COL6A2P12110 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC6.38□□□□□ -1.39
COL6A2P12110 AL139184.1-202ENST00000422303 222 ntBASIC6.38□□□□□ -1.39
COL6A2P12110 OR5W1P-201ENST00000423705 938 ntBASIC6.38□□□□□ -1.39
COL6A2P12110 OR4F29-201ENST00000426406 995 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
COL6A2P12110 OR52S1P-201ENST00000427016 937 ntBASIC6.38□□□□□ -1.39
COL6A2P12110 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.38□□□□□ -1.39
COL6A2P12110 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC6.38□□□□□ -1.39
COL6A2P12110 COX7BP2-201ENST00000437976 242 ntBASIC6.38□□□□□ -1.39
COL6A2P12110 ISCA1P2-201ENST00000438679 421 ntBASIC6.38□□□□□ -1.39
COL6A2P12110 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC6.38□□□□□ -1.39
COL6A2P12110 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.38□□□□□ -1.39
COL6A2P12110 ANKRD26P4-201ENST00000455755 950 ntBASIC6.38□□□□□ -1.39
COL6A2P12110 OR4F3-201ENST00000456475 995 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
COL6A2P12110 AC092754.2-201ENST00000463506 460 ntBASIC6.38□□□□□ -1.39
COL6A2P12110 AC107015.1-201ENST00000466902 747 ntBASIC6.38□□□□□ -1.39
COL6A2P12110 AC108734.3-201ENST00000481241 1165 ntBASIC6.38□□□□□ -1.39
COL6A2P12110 AC107398.1-201ENST00000486904 505 ntBASIC6.38□□□□□ -1.39
COL6A2P12110 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC6.38□□□□□ -1.39
COL6A2P12110 AC022206.1-201ENST00000495947 347 ntBASIC6.38□□□□□ -1.39
COL6A2P12110 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC6.38□□□□□ -1.39
COL6A2P12110 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.38□□□□□ -1.39
COL6A2P12110 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC6.38□□□□□ -1.39
COL6A2P12110 AL049870.4-201ENST00000555741 486 ntBASIC6.38□□□□□ -1.39
COL6A2P12110 AC087465.1-201ENST00000560574 245 ntBASIC6.38□□□□□ -1.39
COL6A2P12110 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.38□□□□□ -1.39
COL6A2P12110 AC010761.3-201ENST00000578819 499 ntTSL 3 BASIC6.38□□□□□ -1.39
COL6A2P12110 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.38□□□□□ -1.39
COL6A2P12110 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.38□□□□□ -1.39
COL6A2P12110 AC097467.3-210ENST00000597939 705 ntTSL 5 BASIC6.38□□□□□ -1.39
COL6A2P12110 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC6.38□□□□□ -1.39
COL6A2P12110 AC021749.1-201ENST00000604322 607 ntBASIC6.38□□□□□ -1.39
COL6A2P12110 AC009237.12-201ENST00000604755 742 ntBASIC6.38□□□□□ -1.39
COL6A2P12110 AC124312.4-201ENST00000605533 310 ntBASIC6.38□□□□□ -1.39
COL6A2P12110 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.38□□□□□ -1.39
COL6A2P12110 AC011374.2-201ENST00000607135 526 ntBASIC6.38□□□□□ -1.39
COL6A2P12110 AP003392.5-201ENST00000607857 415 ntBASIC6.38□□□□□ -1.39
COL6A2P12110 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC6.38□□□□□ -1.39
COL6A2P12110 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.38□□□□□ -1.39
COL6A2P12110 CCL23-203ENST00000615050 624 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
COL6A2P12110 AL031658.2-201ENST00000616850 651 ntBASIC6.38□□□□□ -1.39
COL6A2P12110 ASB8-218ENST00000629941 278 ntTSL 5 BASIC6.38□□□□□ -1.39
COL6A2P12110 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
COL6A2P12110 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
COL6A2P12110 MTCO1P28-201ENST00000574177 1528 ntBASIC6.38□□□□□ -1.39
COL6A2P12110 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
COL6A2P12110 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.38□□□□□ -1.39
COL6A2P12110 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
COL6A2P12110 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COL6A2P12110 AC007114.2-201ENST00000576014 4281 ntBASIC6.37□□□□□ -1.39
COL6A2P12110 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL6A2P12110 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL6A2P12110 AC015799.1-201ENST00000622996 3122 ntBASIC6.37□□□□□ -1.39
COL6A2P12110 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.37□□□□□ -1.39
COL6A2P12110 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COL6A2P12110 AC092692.1-201ENST00000623625 2595 ntBASIC6.37□□□□□ -1.39
COL6A2P12110 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
COL6A2P12110 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL6A2P12110 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
COL6A2P12110 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.37□□□□□ -1.39
COL6A2P12110 SAGE3P-201ENST00000619800 1635 ntBASIC6.37□□□□□ -1.39
COL6A2P12110 SHQ1P1-201ENST00000437111 1544 ntBASIC6.37□□□□□ -1.39
COL6A2P12110 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL6A2P12110 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
COL6A2P12110 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
COL6A2P12110 MYL1-201ENST00000341685 870 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
COL6A2P12110 Y_RNA.51-201ENST00000362725 102 ntBASIC6.37□□□□□ -1.39
COL6A2P12110 RNA5SP382-201ENST00000363355 112 ntBASIC6.37□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms