Protein–RNA interactions for Protein: P10645

CHGA, Chromogranin-A, humanhuman

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGAP10645 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CHGAP10645 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CHGAP10645 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CHGAP10645 AC079777.1-201ENST00000623836 1953 ntBASIC10.28□□□□□ -0.76
CHGAP10645 KCNMA1-212ENST00000406533 5639 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
CHGAP10645 ARHGAP12-204ENST00000375250 4914 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CHGAP10645 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CHGAP10645 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CHGAP10645 AC104051.2-201ENST00000518934 2461 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CHGAP10645 CD109-203ENST00000437994 9401 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CHGAP10645 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
CHGAP10645 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC10.28□□□□□ -0.76
CHGAP10645 MAPK14-203ENST00000310795 1066 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
CHGAP10645 RNU6-692P-201ENST00000384496 107 ntBASIC10.28□□□□□ -0.76
CHGAP10645 Y_RNA.509-201ENST00000384506 99 ntBASIC10.28□□□□□ -0.76
CHGAP10645 FCHSD2-202ENST00000409263 932 ntTSL 5 BASIC10.28□□□□□ -0.76
CHGAP10645 RNA5SP155-201ENST00000411154 129 ntBASIC10.28□□□□□ -0.76
CHGAP10645 RPS20P15-201ENST00000412792 311 ntBASIC10.28□□□□□ -0.76
CHGAP10645 AIMP1P1-201ENST00000418670 937 ntBASIC10.28□□□□□ -0.76
CHGAP10645 AC000089.1-201ENST00000424559 801 ntBASIC10.28□□□□□ -0.76
CHGAP10645 HSPE1P16-201ENST00000426640 348 ntBASIC10.28□□□□□ -0.76
CHGAP10645 VNN3-210ENST00000450865 596 ntTSL 4 BASIC10.28□□□□□ -0.76
CHGAP10645 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC10.28□□□□□ -0.76
CHGAP10645 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC10.28□□□□□ -0.76
CHGAP10645 AP000797.1-201ENST00000478870 387 ntBASIC10.28□□□□□ -0.76
CHGAP10645 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC10.28□□□□□ -0.76
CHGAP10645 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC10.28□□□□□ -0.76
CHGAP10645 RNA5SP473-201ENST00000516402 125 ntBASIC10.28□□□□□ -0.76
CHGAP10645 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC10.28□□□□□ -0.76
CHGAP10645 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC10.28□□□□□ -0.76
CHGAP10645 ACER3-213ENST00000533873 929 ntTSL 2 BASIC10.28□□□□□ -0.76
CHGAP10645 DCN-209ENST00000546745 1026 ntTSL 3 BASIC10.28□□□□□ -0.76
CHGAP10645 AC123904.3-201ENST00000547218 814 ntBASIC10.28□□□□□ -0.76
CHGAP10645 AL442663.2-201ENST00000554385 511 ntBASIC10.28□□□□□ -0.76
CHGAP10645 GTF2IP8-201ENST00000560687 584 ntBASIC10.28□□□□□ -0.76
CHGAP10645 AC009039.1-201ENST00000568711 471 ntTSL 4 BASIC10.28□□□□□ -0.76
CHGAP10645 AL391840.1-201ENST00000571144 367 ntBASIC10.28□□□□□ -0.76
CHGAP10645 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC10.28□□□□□ -0.76
CHGAP10645 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC10.28□□□□□ -0.76
CHGAP10645 AC005084.1-201ENST00000605160 304 ntBASIC10.28□□□□□ -0.76
CHGAP10645 AL592295.2-201ENST00000612578 206 ntBASIC10.28□□□□□ -0.76
CHGAP10645 MIR6503-201ENST00000622884 86 ntBASIC10.28□□□□□ -0.76
CHGAP10645 AC024614.3-201ENST00000637860 256 ntBASIC10.28□□□□□ -0.76
CHGAP10645 MROH3P-202ENST00000635940 2556 ntTSL 5 BASIC10.28□□□□□ -0.76
CHGAP10645 KCNJ15-205ENST00000398930 2914 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
CHGAP10645 SLFN12L-202ENST00000361112 2752 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
CHGAP10645 MKI67P1-201ENST00000604297 1460 ntBASIC10.28□□□□□ -0.76
CHGAP10645 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
CHGAP10645 NPIPB5-205ENST00000424340 3801 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
CHGAP10645 C7-201ENST00000313164 4257 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
CHGAP10645 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
CHGAP10645 EPS15P1-202ENST00000459691 2071 ntBASIC10.27□□□□□ -0.76
CHGAP10645 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
CHGAP10645 FGFR1OP-202ENST00000366847 14166 ntAPPRIS P4 TSL 1 (best) BASIC10.27□□□□□ -0.77
CHGAP10645 TRIM42-201ENST00000286349 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CHGAP10645 CPB2-AS1-202ENST00000606243 2185 ntTSL 2 BASIC10.27□□□□□ -0.77
CHGAP10645 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
CHGAP10645 Y_RNA.402-201ENST00000383972 102 ntBASIC10.27□□□□□ -0.77
CHGAP10645 AL034403.1-201ENST00000399414 885 ntBASIC10.27□□□□□ -0.77
CHGAP10645 RPL5P20-201ENST00000403848 896 ntBASIC10.27□□□□□ -0.77
CHGAP10645 RNU6-248P-201ENST00000410720 107 ntBASIC10.27□□□□□ -0.77
CHGAP10645 AC092745.2-202ENST00000411880 369 ntBASIC10.27□□□□□ -0.77
CHGAP10645 GEMIN2P2-201ENST00000418195 715 ntBASIC10.27□□□□□ -0.77
CHGAP10645 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC10.27□□□□□ -0.77
CHGAP10645 AL389915.1-201ENST00000422463 466 ntBASIC10.27□□□□□ -0.77
CHGAP10645 AC245014.1-201ENST00000427732 381 ntTSL 5 BASIC10.27□□□□□ -0.77
CHGAP10645 AC007365.2-201ENST00000428806 458 ntBASIC10.27□□□□□ -0.77
CHGAP10645 AC015983.1-201ENST00000441577 373 ntBASIC10.27□□□□□ -0.77
CHGAP10645 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC10.27□□□□□ -0.77
CHGAP10645 AC073522.1-201ENST00000483312 377 ntBASIC10.27□□□□□ -0.77
CHGAP10645 LARP1BP2-201ENST00000486594 519 ntBASIC10.27□□□□□ -0.77
CHGAP10645 AC138035.1-201ENST00000499986 992 ntTSL 5 BASIC10.27□□□□□ -0.77
CHGAP10645 NDUFA5P12-201ENST00000503796 343 ntBASIC10.27□□□□□ -0.77
CHGAP10645 AC114324.2-202ENST00000503812 134 ntBASIC10.27□□□□□ -0.77
CHGAP10645 BTG4P1-201ENST00000510421 183 ntBASIC10.27□□□□□ -0.77
CHGAP10645 RN7SKP31-201ENST00000516354 278 ntBASIC10.27□□□□□ -0.77
CHGAP10645 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC10.27□□□□□ -0.77
CHGAP10645 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC10.27□□□□□ -0.77
CHGAP10645 PPIAP14-201ENST00000577627 496 ntBASIC10.27□□□□□ -0.77
CHGAP10645 AL157938.2-202ENST00000588378 875 ntTSL 5 BASIC10.27□□□□□ -0.77
CHGAP10645 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC10.27□□□□□ -0.77
CHGAP10645 AC063977.5-201ENST00000601044 974 ntBASIC10.27□□□□□ -0.77
CHGAP10645 AC011500.1-201ENST00000601963 469 ntBASIC10.27□□□□□ -0.77
CHGAP10645 AC103792.1-201ENST00000603591 919 ntBASIC10.27□□□□□ -0.77
CHGAP10645 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC10.27□□□□□ -0.77
CHGAP10645 AP003122.6-201ENST00000623831 495 ntBASIC10.27□□□□□ -0.77
CHGAP10645 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC10.27□□□□□ -0.77
CHGAP10645 TEX41-293ENST00000630451 690 ntTSL 5 BASIC10.27□□□□□ -0.77
CHGAP10645 PARP9-205ENST00000477522 3128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
CHGAP10645 GCNT2-216ENST00000495262 2214 ntAPPRIS ALT1 TSL 2 BASIC10.27□□□□□ -0.77
CHGAP10645 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
CHGAP10645 DPPA4-201ENST00000335658 2817 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
CHGAP10645 BPIFC-203ENST00000397452 2091 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
CHGAP10645 DCAF13P3-201ENST00000561147 1334 ntBASIC10.27□□□□□ -0.77
CHGAP10645 NLRP9P1-201ENST00000540920 2655 ntBASIC10.27□□□□□ -0.77
CHGAP10645 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CHGAP10645 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CHGAP10645 MAPK10-281ENST00000641170 3070 ntBASIC10.27□□□□□ -0.77
CHGAP10645 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
CHGAP10645 LINC01204-203ENST00000609127 2900 ntTSL 2 BASIC10.27□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 130.6 ms